RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TRAV1-2A0A0B4J238 106 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 A0A0G2JK05 382 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 NR2C1P13056 603 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 ZNF708P17019 499 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 HSD17B12Q53GQ0 312 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 RNFT1Q5M7Z0 435 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 NCCRP1Q6ZVX7 275 aaPredicted RBP19.8■□□□□ 0.76
SIX3-201ENST00000260653 SLC22A16Q86VW1 577 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 ZBTB8BQ8NAP8 495 aaPredicted RBP19.8■□□□□ 0.76
SIX3-201ENST00000260653 OR51A4Q8NGJ6 313 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 RNF133Q8WVZ7 376 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 WDFY2Q96P53 400 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 DERL3Q96Q80 235 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 LIPGQ9Y5X9 500 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 NCOA6Q14686 2063 aaPredicted RBP19.8■□□□□ 0.76
SIX3-201ENST00000260653 PDSS1Q5T2R2 415 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 IDNKQ5T6J7 187 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 PLXDC2Q6UX71 529 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 CFAP77Q6ZQR2 320 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 FCRLAQ7L513 359 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 SLC7A5P1Q8MH63 180 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 OR10S1Q8NGN2 331 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 SLAMF6Q96DU3 332 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 B3GAT2Q9NPZ5 323 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 POLE4Q9NR33 117 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 EFSO43281 561 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 OCM2P0CE71 109 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 SOX2P48431 317 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 SFXN4Q6P4A7 337 aa19.79■□□□□ 0.76
SIX3-201ENST00000260653 GDF2Q9UK05 429 aaPredicted RBP19.79■□□□□ 0.76
SIX3-201ENST00000260653 SRSF10O75494 262 aaKnown RBP19.78■□□□□ 0.76
SIX3-201ENST00000260653 RAB3BP20337 219 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 SLC25A35Q3KQZ1 300 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 Q499Y3 187 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 C10orf128Q5T292 105 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 FAM109AQ8N4B1 249 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 IL17RDQ8NFM7 739 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 SLC25A18Q9H1K4 315 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 C1orf198Q9H425 327 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 ASH2LQ9UBL3 628 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 EMC9Q9Y3B6 208 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 V9GYH0 126 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 TRBV5-5A0A0J9YX44 114 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 CYTIPO60759 359 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 SPINK2P20155 84 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 CCR9P51686 369 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 PMP22Q01453 160 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 ABTB1Q969K4 478 aaPredicted RBP19.78■□□□□ 0.76
SIX3-201ENST00000260653 PNPLA2Q96AD5 504 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 DEFB127Q9H1M4 99 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 DAPK2Q9UIK4 370 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 KCNMB2Q9Y691 235 aa19.78■□□□□ 0.76
SIX3-201ENST00000260653 ZNF254O75437 659 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 H2BFMP0C1H6 154 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 CFL1P23528 166 aaKnown RBP19.77■□□□□ 0.76
SIX3-201ENST00000260653 ZNF133P52736 654 aaPredicted RBP19.77■□□□□ 0.76
SIX3-201ENST00000260653 SLC10A1Q14973 349 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 KCNMB1Q16558 191 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 RSPO4Q2I0M5 234 aaPredicted RBP19.77■□□□□ 0.76
SIX3-201ENST00000260653 THOC7Q6I9Y2 204 aaKnown RBP19.77■□□□□ 0.76
SIX3-201ENST00000260653 IGFL2Q6UWQ7 119 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 CATSPERDQ86XM0 798 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 C20orf196Q8IYI0 205 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 PHYHIPQ92561 330 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 ZNF837Q96EG3 531 aaPredicted RBP19.77■□□□□ 0.76
SIX3-201ENST00000260653 ULBP2Q9BZM5 246 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 R4GMQ9 66 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 CEP295Q9C0D2 2601 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 HPGDSO60760 199 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 SRMP19623 302 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 SGCAQ16586 387 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 CEP78Q5JTW2 689 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 DEGS2Q6QHC5 323 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 OR2AJ1Q8NGZ0 328 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 ACKR4Q9NPB9 350 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 RCE1Q9Y256 329 aa19.77■□□□□ 0.76
SIX3-201ENST00000260653 ACOT7O00154 380 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 DHHO43323 396 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 TBX1O43435 398 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 SLC2A2P11168 524 aaPredicted RBP19.76■□□□□ 0.75
SIX3-201ENST00000260653 THBS2P35442 1172 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 C3AR1Q16581 482 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.76■□□□□ 0.75
SIX3-201ENST00000260653 MEIOBQ8N635 442 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 GPR148Q8TDV2 347 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 RBM24Q9BX46 236 aaKnown RBP19.76■□□□□ 0.75
SIX3-201ENST00000260653 ABCB10Q9NRK6 738 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 AK6Q9Y3D8 172 aaKnown RBP19.76■□□□□ 0.75
SIX3-201ENST00000260653 APC2O95996 2303 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 FOXC1Q12948 553 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 AAED1Q7RTV5 226 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 DIRAS2Q96HU8 199 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 ZNF416Q9BWM5 594 aa19.76■□□□□ 0.75
SIX3-201ENST00000260653 ANKRD61A6NGH8 418 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 LOC110117498-PIK3R3F6TDL0 507 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 GPR171O14626 319 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 RER1O15258 196 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 DOK2O60496 412 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 UPK1BO75841 260 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 INTS12Q96CB8 462 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms