RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 IRX3P78415 501 aaPredicted RBP0.84□□□□□ -2.27
CDH1-211ENST00000567320 MAD2L1BPQ15013 274 aaPredicted RBP0.84□□□□□ -2.27
CDH1-211ENST00000567320 RNASE13Q5GAN3 156 aaKnown RBP0.84□□□□□ -2.27
CDH1-211ENST00000567320 HSD17B11Q8NBQ5 300 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 PIK3IP1Q96FE7 263 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 ZNF607Q96SK3 696 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 HSD3B7Q9H2F3 369 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 ZSCAN16Q9H4T2 348 aaPredicted RBP0.84□□□□□ -2.27
CDH1-211ENST00000567320 C8orf17Q9NRJ1 99 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 TAS2R1Q9NYW7 299 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 CDHR2Q9BYE9 1310 aa0.84□□□□□ -2.28
CDH1-211ENST00000567320 TRIP11Q15643 1979 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 KRT87PA6NCN2 255 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 OR6C74A6NCV1 312 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 PRKAB2O43741 272 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 GALR1P47211 349 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 PRLHRP49683 370 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 CDK5Q00535 292 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 DGUOKQ16854 277 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 ZNF101Q8IZC7 436 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 MAGEE2Q8TD90 523 aaPredicted RBP0.83□□□□□ -2.28
CDH1-211ENST00000567320 CNDP1Q96KN2 507 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 MFFQ9GZY8 342 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 KCNJ16Q9NPI9 418 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 EPS15L1Q9UBC2 864 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 ZNF337Q9Y3M9 751 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 U3KQV3 271 aa0.83□□□□□ -2.28
CDH1-211ENST00000567320 COL22A1Q8NFW1 1626 aaPredicted RBP0.82□□□□□ -2.28
CDH1-211ENST00000567320 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 TICRRQ7Z2Z1 1910 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 PRRG1O14668 218 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 SEC22BO75396 215 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 OR7A10O76100 309 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 C2P06681 752 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 ZNF250P15622 560 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 ATP6V1C1P21283 382 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 PAX7P23759 505 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 CHI3L1P36222 383 aaPredicted RBP0.82□□□□□ -2.28
CDH1-211ENST00000567320 ATP6V1E1P36543 226 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 CEACAM3P40198 252 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 ATP1B3P54709 279 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 BIKQ13323 160 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 SPECC1LQ69YQ0 1117 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 SPNS3Q6ZMD2 512 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 SLC35G3Q8N808 338 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 LRRC75AQ8NAA5 344 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 RBM14Q96PK6 669 aaKnown RBP0.82□□□□□ -2.28
CDH1-211ENST00000567320 SLC38A2Q96QD8 506 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 RBBP8Q99708 897 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 UFSP2Q9NUQ7 469 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 ASF1BQ9NVP2 202 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 ABCC9O60706 1549 aa0.82□□□□□ -2.28
CDH1-211ENST00000567320 IGHV1-3A0A0C4DH29 117 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 IGHV7-4-1A0A0J9YVY3 117 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 FAM47DPA6NHR8 397 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 FCMRO60667 390 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 AK1P00568 194 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 IL10P22301 178 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 LOXP28300 417 aaPredicted RBP0.81□□□□□ -2.28
CDH1-211ENST00000567320 MPV17P39210 176 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 CDKN2DP55273 166 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 TWF1Q12792 350 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 YIF1BQ5BJH7 314 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 TEX30Q5JUR7 227 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 SLC10A5Q5PT55 438 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 MED27Q6P2C8 311 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 LIX1Q8N485 282 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 OR10J6PQ8NGY7 276 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 MRGPRFQ96AM1 343 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 C18orf15Q96N68 181 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 ZFP3Q96NJ6 502 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 CSPG4P5Q96PW8 444 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 PPA2Q9H2U2 334 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 POLE4Q9NR33 117 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 NLE1Q9NVX2 485 aaPredicted RBP0.81□□□□□ -2.28
CDH1-211ENST00000567320 PIPOXQ9P0Z9 390 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 RNF14Q9UBS8 474 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 CHRNA9Q9UGM1 479 aa0.81□□□□□ -2.28
CDH1-211ENST00000567320 PRRC2BQ5JSZ5 2229 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 IGHV3-49A0A0A0MS15 119 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 METTL21EPA6NDL7 271 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 DYNC1I1O14576 645 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 EIF1BO60739 113 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 SCGNO76038 276 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 SLC22A5O76082 557 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 LHBP01229 141 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 IGLV7-43P04211 117 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 CD3GP09693 182 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 EPB41P11171 864 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 GAP43P17677 238 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 EIF1P41567 113 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 YAP1P46937 504 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 RGS4P49798 205 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 ARFIP1P53367 373 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 CCNA1P78396 465 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 ECH1Q13011 328 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 DMC1Q14565 340 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 SFT2D3Q587I9 215 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 TCEAL5Q5H9L2 206 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 AVPI1Q5T686 147 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms