RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ST7LQ8TDW4 575 aa15.99■□□□□ 0.15
COMMD4-208ENST00000563220 MAP6Q96JE9 813 aa15.99■□□□□ 0.15
COMMD4-208ENST00000563220 TPK1Q9H3S4 243 aa15.99■□□□□ 0.15
COMMD4-208ENST00000563220 SIAEQ9HAT2 523 aa15.99■□□□□ 0.15
COMMD4-208ENST00000563220 FRRS1LQ9P0K9 344 aa15.99■□□□□ 0.15
COMMD4-208ENST00000563220 SPRR3Q9UBC9 169 aa15.99■□□□□ 0.15
COMMD4-208ENST00000563220 TRGV5A0A0B4J1U4 118 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 FUOMA2VDF0 154 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 WISP2O76076 250 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 IL1AP01583 271 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 BCAP31P51572 246 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 ZNF133P52736 654 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-208ENST00000563220 TRAM1Q15629 374 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 OR10H5Q8NGA6 315 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 OR52N5Q8NH56 324 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 MED18Q9BUE0 208 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 MMP27Q9H306 513 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 EMC7Q9NPA0 242 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 CYB5R1Q9UHQ9 305 aa15.98■□□□□ 0.15
COMMD4-208ENST00000563220 LAMA5O15230 3695 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 ZFPL1O95159 310 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 BMP4P12644 408 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 ALKBH1Q13686 389 aaKnown RBP15.97■□□□□ 0.15
COMMD4-208ENST00000563220 ACSM3Q53FZ2 586 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 C10orf128Q5T292 105 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 FAM27D1Q5T7N8 215 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 KCTD18Q6PI47 426 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-208ENST00000563220 CEACAM19Q7Z692 300 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 SPACA3Q8IXA5 215 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 SNRNP27Q8WVK2 155 aaKnown RBP15.97■□□□□ 0.15
COMMD4-208ENST00000563220 INTS12Q96CB8 462 aaKnown RBP15.97■□□□□ 0.15
COMMD4-208ENST00000563220 EXO5Q9H790 373 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 ZNF407Q9C0G0 2248 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 FRYQ5TBA9 3013 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 NR2C1P13056 603 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 SOX6P35712 828 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 RORCP51449 518 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 MRPL28Q13084 256 aaKnown RBP15.97■□□□□ 0.15
COMMD4-208ENST00000563220 INAQ16352 499 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 IGFL3Q6UXB1 125 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 AAED1Q7RTV5 226 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 KRT77Q7Z794 578 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 ZADH2Q8N4Q0 377 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 OR2G2Q8NGZ5 317 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 RNF128Q8TEB7 428 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 SLC25A46Q96AG3 418 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 ZNF837Q96EG3 531 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-208ENST00000563220 WDYHV1Q96HA8 205 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 POLE4Q9NR33 117 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 RCE1Q9Y256 329 aa15.97■□□□□ 0.15
COMMD4-208ENST00000563220 SMIM30A4D0T7 59 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 TFECO14948 347 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-208ENST00000563220 DHHO43323 396 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 TMCC2O75069 709 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 PDGFAP04085 211 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 ZNF24P17028 368 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 EIF2S3P41091 472 aaKnown RBP15.96■□□□□ 0.15
COMMD4-208ENST00000563220 KCNMB1Q16558 191 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 TRIM16LQ309B1 348 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 OR7E24Q6IFN5 339 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 BTLAQ7Z6A9 289 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 PRSS35Q8N3Z0 413 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 FNDC9Q8TBE3 224 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 HAVCR2Q8TDQ0 301 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 PNPLA2Q96AD5 504 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 KCNS3Q9BQ31 491 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 KCNN2Q9H2S1 579 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 ZNF281Q9Y2X9 895 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 LRP12Q9Y561 859 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 LHFPL6Q9Y693 200 aa15.96■□□□□ 0.15
COMMD4-208ENST00000563220 CACNA1CQ13936 2221 aa15.96■□□□□ 0.14
COMMD4-208ENST00000563220 HSPB2A8KAH6 182 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 GPRIN2O60269 458 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 SYNGR4O95473 234 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 PNPP00491 289 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 CD40LGP29965 261 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 CAV3P56539 151 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 HSPB2Q16082 182 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 RGP1Q92546 391 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 RBM24Q9BX46 236 aaKnown RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 C6orf62Q9GZU0 229 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 KIAA1549Q9HCM3 1950 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 PAQR5Q9NXK6 330 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 PCDHGA9Q9Y5G4 932 aaKnown RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 APC2O95996 2303 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 IGKV3D-15A0A087WSY6 115 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 OR4C45A6NMZ5 311 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 K7EM74 188 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 CASKO14936 926 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 SLC43A1O75387 559 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 IGHG3P01860 377 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 CPN1P15169 458 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 MAGEB1P43366 347 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 KIR3DL2P43630 455 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 PSMD7P51665 324 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 RIDAP52758 137 aaKnown RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 HNRNPA0Q13151 305 aaKnown RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 SGCAQ16586 387 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 ZMAT1Q5H9K5 638 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 FDX2Q6P4F2 183 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms