RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	SERPINA12	Q8IW75	414 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	CTAGE3P	Q8IX95	158 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	AQP12A	Q8IXF9	295 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	FAM9C	Q8IZT9	166 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	MMGT1	Q8N4V1	131 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	OR7G2	Q8NG99	324 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	OR9A2	Q8NGT5	310 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	SLC26A7	Q8TE54	656 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	KCTD4	Q8WVF5	259 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	SELENOM	Q8WWX9	145 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	IQCG	Q9H095	443 aa	Known RBP	5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	FKRP	Q9H9S5	495 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	GSN-AS1	Q9NRJ2	163 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	HIF1AN	Q9NWT6	349 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	GRID1	Q9ULK0	1009 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	TMED3	Q9Y3Q3	217 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	FKBP7	Q9Y680	259 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585	COX11	Q9Y6N1	276 aa		5.22	□□□□□ -1.57
CPSF7-222	ENST00000544585		A0A1W2PRB8	838 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	CIB4	A0PJX0	185 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	FAM159B	A6NKW6	160 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF724	A8MTY0	619 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF195	O14628	629 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	PIAS1	O75925	651 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	LYZL6	O75951	148 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	KLHL2	O95198	593 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	PDYN	P01213	254 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	C2	P06681	752 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	NGFR	P08138	427 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	RBP1	P09455	135 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	IFI6	P09912	130 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	HPGD	P15428	266 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	CCNA2	P20248	432 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	TNFRSF1B	P20333	461 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	PAX7	P23759	505 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ELK4	P28324	431 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	SSTR1	P30872	391 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	LCN1	P31025	176 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	GABRA3	P34903	492 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ISL1	P61371	349 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	HTD2	P86397	168 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF155	Q12901	538 aa	Predicted RBP	5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	VPS26B	Q4G0F5	336 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	BTNL8	Q6UX41	500 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	APOOL	Q6UXV4	268 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ANKRD46	Q86W74	232 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF100	Q8IYN0	542 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	C1orf87	Q8N0U7	546 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	CEP112	Q8N8E3	955 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	OR4F6	Q8NGB9	312 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	LRRC8C	Q8TDW0	803 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF418	Q8TF45	676 aa	Predicted RBP	5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ABHD3	Q8WU67	409 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	FAM216A	Q8WUB2	273 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	EXOSC8	Q96B26	276 aa	Known RBP	5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	RNF145	Q96MT1	663 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	NEURL2	Q9BR09	285 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF696	Q9H7X3	374 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	MED17	Q9NVC6	651 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	TAS2R7	Q9NYW3	318 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	WDR83OS	Q9Y284	106 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	EXPH5	Q8NEV8	1989 aa		5.21	□□□□□ -1.58
CPSF7-222	ENST00000544585	HEATR1	Q9H583	2144 aa	Known RBP	5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	IGHV4-61	A0A0C4DH41	118 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	TRBV2	A0A0J9YWF9	115 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	GNG14	A0A1W2PPG7	69 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585		A0A1W2PQD3	144 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	TCRBV9S1A1T	A0A576	114 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	CCT8L1P	A6NM43	557 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	KIF2A	O00139	706 aa	Predicted RBP	5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	UPK1A	O00322	258 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	GMFG	O60234	142 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	SNX3	O60493	162 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	VENTX	O95231	258 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	OTC	P00480	354 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	KRT6A	P02538	564 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	KRT6B	P04259	564 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	TFAP2A	P05549	437 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	LIPF	P07098	398 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	IL3	P08700	152 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	CTAGE8	P0CG41	777 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	ACP2	P11117	423 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	PRPS2	P11908	318 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	IGHV1-2	P23083	117 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	AHCY	P23526	432 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	SFTPD	P35247	375 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	MNDA	P41218	407 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	MAGEB1	P43366	347 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	RFX3	P48380	749 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	KRT6C	P48668	564 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	NCBP2	P52298	156 aa	Known RBP eCLIP	5.2	□□□□□ -1.58	2e-6	■■□□□ 12.6
CPSF7-222	ENST00000544585	ACTG1	P63261	375 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	DR1	Q01658	176 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	SRSF4	Q08170	494 aa	Known RBP	5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	RASGEF1B	Q0VAM2	473 aa		5.2	□□□□□ -1.58
CPSF7-222	ENST00000544585	NAB1	Q13506	487 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms