RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CLTAP09496 248 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZNF250P15622 560 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 ATF6P18850 670 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 FUT3P21217 361 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 CFHR2P36980 270 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 SLC26A3P40879 764 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 BCAP31P51572 246 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 STX17P56962 302 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 TAS2R39P59534 338 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 NUTF2P61970 127 aaKnown RBP2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 GGTLC2Q14390 218 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 HERPUD1Q15011 391 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 RFX4Q33E94 735 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 TTLL9Q3SXZ7 439 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 CHRFAM7AQ494W8 412 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 FBXO48Q5FWF7 155 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 LIN9Q5TKA1 542 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 LCN12Q6JVE5 192 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 NPSR1Q6W5P4 371 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 ASCL4Q6XD76 172 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 SLC35D2Q76EJ3 337 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 FAM58AQ8N1B3 248 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 PDCL2Q8N4E4 241 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 FAM71E2Q8N5Q1 922 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 OR5T3Q8NGG3 340 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 BLOC1S5Q8TDH9 187 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZBED3Q96IU2 234 aaPredicted RBP2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 COL21A1Q96P44 957 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 OR5B12Q96R08 314 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 NRTNQ99748 197 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 YTHDF1Q9BYJ9 559 aaKnown RBP2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 STMN4Q9H169 189 aaPredicted RBP2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 OR2AG1Q9H205 316 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 HAUS4Q9H6D7 363 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 RETNQ9HD89 108 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 NUFIP1Q9UHK0 495 aaKnown RBP2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZNF225Q9UK10 706 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZNF318Q5VUA4 2279 aa2.29□□□□□ -2.04
RNU6-840P-201ENST00000517275 NEURL4Q96JN8 1562 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TMEM94Q12767 1356 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 LOC100653049A0A140TA62 436 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 PLAC8L1A1L4L8 177 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 M0QX08 132 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 PES1O00541 588 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 FLOT1O75955 427 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 KRT34O76011 436 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 SCELO95171 688 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 RAB3DO95716 219 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 LSM8O95777 96 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TGM6O95932 706 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 HPRT1P00492 218 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 INSP01308 110 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 IGLV2-23P01705 113 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 IGHV4-34P06331 123 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 RETP07949 1114 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 STAG3L2P0CL84 134 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZNF30P17039 623 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 CSKP41240 450 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 CAV2P51636 162 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 NCBP2P52298 156 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZNF138P52744 262 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 CLDN6P56747 220 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 RPS15AP62244 130 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZNF33AQ06730 810 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 CDH17Q12864 832 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 IFT88Q13099 833 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 GUCA2BQ16661 112 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TRMT5Q32P41 509 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 KRTAP27-1Q3LI81 207 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TPTE2P1Q5T6R2 138 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 GPR107Q5VW38 600 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 WDR82Q6UXN9 313 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 MBOAT1Q6ZNC8 495 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 MBOAT2Q6ZWT7 520 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 THOC6Q86W42 341 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 MREGQ8N565 214 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 CSGALNACT2Q8N6G5 542 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 NOXO1Q8NFA2 376 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 OR2L5Q8NG80 312 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ITFG1Q8TB96 612 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 GEMIN6Q8WXD5 167 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 MARC2Q969Z3 335 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TMEM230Q96A57 120 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 RPEQ96AT9 228 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ANKRD9Q96BM1 317 aaPredicted RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 LRRC39Q96DD0 335 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 PIGUQ9H490 435 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 PATZ1Q9HBE1 687 aaKnown RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 DMAP1Q9NPF5 467 aaPredicted RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ACP6Q9NPH0 428 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 RPS10P5Q9NQ39 176 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ZC4H2Q9NQZ6 224 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 ST3GAL6Q9Y274 331 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TRAPPC4Q9Y296 219 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 TP53TG5Q9Y2B4 290 aa2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 RAI1Q7Z5J4 1906 aaPredicted RBP2.28□□□□□ -2.04
RNU6-840P-201ENST00000517275 UBN2Q6ZU65 1347 aa2.27□□□□□ -2.05
RNU6-840P-201ENST00000517275 IGLV1-36A0A0B4J1U3 117 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms