RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CDH6P55285 790 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 BEX3Q00994 111 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 GBE1Q04446 702 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 GINS1Q14691 196 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 LINC00483Q53H64 154 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 AADACL4Q5VUY2 407 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 AP1ARQ63HQ0 302 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 FAM71E1Q6IPT2 247 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 CERS6Q6ZMG9 384 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 Q6ZR03 302 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 PGAM4Q8N0Y7 254 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 SPERTQ8NA61 448 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 NOXO1Q8NFA2 376 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 OR10J6PQ8NGY7 276 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 OR5W2Q8NH69 310 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 ZNF502Q8TBZ5 544 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 ACMSDQ8TDX5 336 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 ELMO1Q92556 727 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 SLC29A1Q99808 456 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 CCDC77Q9BR77 488 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 CRLF2Q9HC73 371 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 NECAP2Q9NVZ3 263 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 MAPK8IP3Q9UPT6 1336 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 IGLV4-60A0A075B6I1 120 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 IGHV3-74A0A0B4J1X5 117 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 GLYATL1P3A0A0U1RQE8 302 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 LOC100653049A0A140TA62 436 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 SMCO3A2RU48 225 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 AIM2O14862 343 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 RNF13O43567 381 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 WBP4O75554 376 aaKnown RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 KRT34O76011 436 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 GABARAPO95166 117 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 CTDNEP1O95476 244 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 SERPINA5P05154 406 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 ANXA5P08758 320 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 MAS1LP35410 378 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 CEACAM6P40199 344 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 CSNK1A1P48729 337 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 ADARB1P78563 741 aaKnown RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 SLC25A11Q02978 314 aaKnown RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 MXD1Q05195 221 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 TRDNQ13061 729 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 ERCC8Q13216 396 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 LY6G6FQ5SQ64 297 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 ARMC12Q5T9G4 340 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 RAET1LQ5VY80 246 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 DNAJC24Q6P3W2 148 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 H1FOOQ8IZA3 346 aaPredicted RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 PDCL2Q8N4E4 241 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 BBOF1Q8ND07 529 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 UBALD1Q8TB05 177 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 DUS3LQ96G46 650 aaKnown RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 ZNF578Q96N58 590 aaPredicted RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 NDFIP1Q9BT67 221 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 SLC7A5P2Q9GIP4 190 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 XKR8Q9H6D3 395 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 SAMSN1Q9NSI8 373 aaKnown RBP2.84□□□□□ -1.95
VPS36-206ENST00000497149 IL20Q9NYY1 176 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 ST3GAL6Q9Y274 331 aa2.84□□□□□ -1.95
VPS36-206ENST00000497149 TMEM94Q12767 1356 aa2.84□□□□□ -1.96
VPS36-206ENST00000497149 GPATCH8Q9UKJ3 1502 aaKnown RBP2.83□□□□□ -1.96
VPS36-206ENST00000497149 OR2J3O76001 311 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 S100A6P06703 90 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 NAMPTP43490 491 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 PRMT2P55345 433 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 RAP1AP62834 184 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 MAB21L1Q13394 359 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 MRPL23Q16540 153 aaKnown RBP2.83□□□□□ -1.96
VPS36-206ENST00000497149 PTPN20Q4JDL3 420 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 FBXO48Q5FWF7 155 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 BIVMQ86UB2 503 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 SPATA24Q86W54 205 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 ZNF695Q8IW36 515 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 GTPBP8Q8N3Z3 284 aaPredicted RBP2.83□□□□□ -1.96
VPS36-206ENST00000497149 OR2L8Q8NGY9 312 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 OR8K3Q8NH51 312 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 AGR3Q8TD06 166 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 PARP12Q9H0J9 701 aaKnown RBP2.83□□□□□ -1.96
VPS36-206ENST00000497149 UXTQ9UBK9 157 aaPredicted RBP2.83□□□□□ -1.96
VPS36-206ENST00000497149 ZNF222Q9UK12 451 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 MROH5Q6ZUA9 1318 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 NOTCH2Q04721 2471 aa2.83□□□□□ -1.96
VPS36-206ENST00000497149 CAMTA1Q9Y6Y1 1673 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 A0A1W2PP18 115 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 LRCOL1A6NCL2 159 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 SMCO2A6NFE2 343 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 C9JVG2 144 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 CASC3O15234 703 aaKnown RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 RNF113AO15541 343 aaKnown RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 FGFR1OPO95684 399 aaKnown RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 HLA-DPB1P04440 258 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 BCHEP06276 602 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 ASGR1P07306 291 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 PABPC4LP0CB38 370 aaKnown RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 CCNB1P14635 433 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 RAB3BP20337 219 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 GALP22466 123 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms