RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 IGKV1D-43A0A0B4J1Z2 117 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 IGKV2-29A2NJV5 120 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 GOLGA8SH3BPF8 625 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 MAPK13O15264 365 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CLDN3O15551 220 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CDC40O60508 579 aaKnown RBP eCLIP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 PLIN3O60664 434 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 SCGB2A1O75556 95 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 DIRAS1O95057 198 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 UTS2O95399 124 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 IGHV3-11P01762 117 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ANGP03950 147 aaKnown RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 HEXBP07686 556 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 RAB3AP20336 220 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 OPRD1P41143 372 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 QARSP47897 775 aaKnown RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ZNF83P51522 516 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ZNF138P52744 262 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 NUTF2P61970 127 aaKnown RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 PPP1CBP62140 327 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 KLRB1Q12918 225 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 FAM53BQ14153 422 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 QPRTQ15274 297 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 FILIP1LQ4L180 1135 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 RNASE13Q5GAN3 156 aaKnown RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 STUMQ69YW2 141 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 AMMECR1LQ6DCA0 310 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 GUSBP11Q6P575 273 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 PLET1Q6UQ28 207 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TMEM205Q6UW68 189 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ECHDC2Q86YB7 292 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 PUSL1Q8N0Z8 303 aaKnown RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 OR6N1Q8NGY5 312 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TRMT10AQ8TBZ6 339 aaKnown RBP0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TMEM54Q969K7 222 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 OR8B4Q96RC9 309 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 NPY6RQ99463 290 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 RARRES2Q99969 163 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 METTL7AQ9H8H3 244 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 SLC38A10Q9HBR0 1119 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 C8orf17Q9NRJ1 99 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 HMGXB4Q9UGU5 601 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TRIP11Q15643 1979 aa0.36□□□□□ -2.35
RNU6-1048P-201ENST00000364054 IGLV10-54A0A075B6I4 117 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 IGLV3-22A0A075B6J6 115 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CHADO15335 359 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 NVLO15381 856 aaKnown RBP0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 AQP9O43315 295 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 SYNGR2O43760 224 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CNMDO75829 334 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 IGHV2-5P01817 119 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 FUT1P19526 365 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CCR1P32246 355 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 MAS1LP35410 378 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ATP5C1P36542 298 aaKnown RBP0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 HCAR3P49019 387 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ARFIP1P53367 373 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 GMFBP60983 142 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CDK5Q00535 292 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TWF1Q12792 350 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 SCGB2A2Q13296 93 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 PTPN20Q4JDL3 420 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TMEM69Q5SWH9 247 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 DNAJC24Q6P3W2 148 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 ZNF101Q8IZC7 436 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 HDDC3Q8N4P3 179 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 MRPL43Q8N983 215 aaKnown RBP0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TRIM44Q96DX7 344 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 C12orf42Q96LP6 360 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TGM7Q96PF1 710 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TCHPQ9BT92 498 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 FGF23Q9GZV9 251 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 FN3KRPQ9HA64 309 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 KIF3AQ9Y496 699 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 R4GN34 69 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CDHR2Q9BYE9 1310 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 MAPK8IP3Q9UPT6 1336 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 CACNA1DQ01668 2161 aa0.35□□□□□ -2.35
RNU6-1048P-201ENST00000364054 TICRRQ7Z2Z1 1910 aa0.34□□□□□ -2.35
RNU6-1048P-201ENST00000364054 SDHAF1A6NFY7 115 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 F8WDY8 70 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 H7C417 338 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 CCL21O00585 134 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 PRKAB2O43741 272 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 SEMA3DO95025 777 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 AIFM1O95831 613 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 IGLV3-25P01717 112 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 ATF6P18850 670 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 CSRP1P21291 193 aaKnown RBP0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 CYP2F1P24903 491 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 P2RX1P51575 399 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 UBE2E1P51965 193 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 BTN1A1Q13410 526 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 C1orf61Q13536 156 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 ZSCAN26Q16670 478 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 PCOTHQ58A44 107 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 TTC19Q6DKK2 380 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 FBXW12Q6X9E4 464 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 CCDC73Q6ZRK6 1079 aa0.34□□□□□ -2.36
RNU6-1048P-201ENST00000364054 SLC38A6Q8IZM9 456 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms