RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PERPQ96FX8 193 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 RAB3IPQ96QF0 476 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-201ENST00000340074 OR2H1Q9GZK4 316 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 FKBP7Q9Y680 259 aa13.19□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF469Q96JG9 3925 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-201ENST00000340074 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 TMCC2O75069 709 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 GAAP10253 952 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF23P17027 643 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 NR4A1P22736 598 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 CDKN1AP38936 164 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 DAPP51397 102 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 PCBD1P61457 104 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-201ENST00000340074 GALK2Q01415 458 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 DAG1Q14118 895 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 MEP1BQ16820 701 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 TBC1D28Q2M2D7 210 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 SLC27A4Q6P1M0 643 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-201ENST00000340074 SYT9Q86SS6 491 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 HIPK1Q86Z02 1210 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 SLC37A3Q8NCC5 494 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 GRIP2Q9C0E4 1043 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 RACGAP1Q9H0H5 632 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 C1orf198Q9H425 327 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 PAPOLBQ9NRJ5 636 aaKnown RBP13.18□□□□□ -0.3
UBE3B-201ENST00000340074 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 TIMM10BQ9Y5J6 103 aa13.18□□□□□ -0.3
UBE3B-201ENST00000340074 H3BNX3 289 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 STOMP27105 288 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 PYCR1P32322 319 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 GRK5P34947 590 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 APLNRP35414 380 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 THBS4P35443 961 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 SERPINF1P36955 418 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 PTH2RP49190 550 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 LSM6P62312 80 aaKnown RBP13.17□□□□□ -0.3
UBE3B-201ENST00000340074 GLO1Q04760 184 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 CRMP1Q14194 572 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 ADIPOQQ15848 244 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 KCNMB1Q16558 191 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 C11orf71Q6IPW1 123 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 ACSM5Q6NUN0 579 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 LRRC75A-AS1Q8N1F1 130 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 SLC26A10Q8NG04 563 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-201ENST00000340074 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
UBE3B-201ENST00000340074 GSX2Q9BZM3 304 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 WNT5BQ9H1J7 359 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF442Q9H7R0 627 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 CDH20Q9HBT6 801 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF701Q9NV72 531 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-201ENST00000340074 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
UBE3B-201ENST00000340074 RIIAD1A6NNX1 92 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 GPRIN2O60269 458 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 SNAP29O95721 258 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 IFNGP01579 166 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 OR4A8P0C604 315 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 PAX1P15863 534 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 ZNF3P17036 446 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 CCNOP22674 350 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 CDK5Q00535 292 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 SCRN3Q0VDG4 424 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 AQP6Q13520 282 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 GINS1Q14691 196 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 MST1LQ2TV78 715 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 ZFP1Q6P2D0 407 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 OR9Q1Q8NGQ5 310 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 OR2T4Q8NH00 348 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 ZNRF4Q8WWF5 429 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 DNAJC9Q8WXX5 260 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 WACQ9BTA9 647 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 CACNG6Q9BXT2 260 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 OR51B6Q9H340 312 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 CMC2Q9NRP2 79 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 ASH2LQ9UBL3 628 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
UBE3B-201ENST00000340074 LOC100509620A0A075B734 347 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 HLA-DQA2P01906 255 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 TFP02787 698 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 GYPBP06028 91 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 FAM157BP0CG42 384 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 CLUP10909 449 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 GLRXP35754 106 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 ATP5J2P56134 94 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 TEKQ02763 1124 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 SWI5Q1ZZU3 235 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 TMEM236Q5W0B7 351 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 SPNS3Q6ZMD2 512 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms