RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 LINC00587B1AMM8 73 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 ST6GAL1P15907 406 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 MAOAP21397 527 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 SLC17A1Q14916 467 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 TMEM225Q6GV28 225 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 FDX2Q6P4F2 183 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 EDAQ92838 391 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 DGAT2Q96PD7 388 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 KIAA0100Q14667 2235 aaKnown RBP12.11□□□□□ -0.47
SKA3-202ENST00000314759 GDI1P31150 447 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 PBX2P40425 430 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 SNTB1Q13884 538 aaKnown RBP12.11□□□□□ -0.47
SKA3-202ENST00000314759 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
SKA3-202ENST00000314759 GLYATL3Q5SZD4 288 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 C11orf87Q6NUJ2 197 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 ZNF615Q8N8J6 731 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 BIN3Q9NQY0 253 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 NUP210LQ5VU65 1888 aa12.11□□□□□ -0.47
SKA3-202ENST00000314759 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 SULT1C2O00338 296 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 BCL2L11O43521 198 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ACTL6AO96019 429 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 HLA-DQA2P01906 255 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 APOC1P02654 83 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 RNH1P13489 461 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 RFC3P40938 356 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 FUT7Q11130 342 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ZNF345Q14585 488 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TOMM20Q15388 145 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TMEM71Q6P5X7 295 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 SVBPQ8N300 66 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 OR13C8Q8NGS7 320 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 EDEM2Q9BV94 578 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 MYOZ1Q9NP98 299 aaPredicted RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 PRTFDC1Q9NRG1 225 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 FARSAQ9Y285 508 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 MRPS18BQ9Y676 258 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 ARID1BQ8NFD5 2236 aaPredicted RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 TRANK1O15050 2925 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TMEM200CA6NKL6 621 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 HSPB2A8KAH6 182 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 PHYHO14832 338 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 OR2F2O95006 317 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 CRYBA1P05813 215 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 HPGDP15428 266 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ZNF28P17035 718 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 CD34P28906 385 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 NTSR1P30989 418 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 OR2F1Q13607 317 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 HSPB2Q16082 182 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 SCGB2B2Q4G0G5 96 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TEX30Q5JUR7 227 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ASB5Q8WWX0 329 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 SLC6A7Q99884 636 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 RPP25Q9BUL9 199 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 UBQLN4Q9NRR5 601 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 MYEF2Q9P2K5 600 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 CGGBP1Q9UFW8 167 aaPredicted RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 MSRAQ9UJ68 235 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 RANBP2P49792 3224 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 TTLL8A6PVC2 850 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ZNF736B4DX44 427 aaPredicted RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 EIF3GO75821 320 aaKnown RBP eCLIP12.1□□□□□ -0.47
SKA3-202ENST00000314759 CYB5AP00167 134 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 SLC25A4P12235 298 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 HTR2CP28335 458 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TACR3P29371 465 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 CD96P40200 585 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 NPBWR1P48145 328 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ATP1B3P54709 279 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 S100A12P80511 92 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 MFGE8Q08431 387 aaPredicted RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 MICBQ29980 383 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 ZNF679Q8IYX0 411 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 BPIFB2Q8N4F0 458 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 RNF128Q8TEB7 428 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 PPP1R1CQ8WVI7 109 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 THRSPQ92748 146 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 PDCD10Q9BUL8 212 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 TAS2R4Q9NYW5 299 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 DHDHQ9UQ10 334 aa12.1□□□□□ -0.47
SKA3-202ENST00000314759 NOP16Q9Y3C1 178 aaKnown RBP12.1□□□□□ -0.47
SKA3-202ENST00000314759 A0A1W2PPC1 479 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms