RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 KCNMB1Q16558 191 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 TPRA1Q86W33 373 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 LINC00346Q8IVM7 164 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 C20orf196Q8IYI0 205 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 OR2AJ1Q8NGZ0 328 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 OR2G2Q8NGZ5 317 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 ST7LQ8TDW4 575 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 HSD17B8Q92506 261 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 ZDHHC11Q9H8X9 412 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 MCTS1Q9ULC4 181 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 LRP12Q9Y561 859 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 CSAG2Q9Y5P2 127 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 TRGV5A0A0B4J1U4 118 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 CCR9P51686 369 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 RPS11P62280 158 aaKnown RBP eCLIP13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 INAQ16352 499 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 SPATC1Q76KD6 591 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 CHMP1BQ7LBR1 199 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 AAED1Q7RTV5 226 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 OR13C5Q8NGS8 318 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 ULBP2Q9BZM5 246 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 DEFB127Q9H1M4 99 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 C1orf198Q9H425 327 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 SMURF1Q9HCE7 757 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 FOXD3Q9UJU5 478 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF879B4DU55 563 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 GPR171O14626 319 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 DVL2O14641 736 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 TFECO14948 347 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 CFL1P23528 166 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 MAPK3P27361 379 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 CDAP32320 146 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF84P51523 738 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 OR7E24Q6IFN5 339 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 ZADH2Q8N4Q0 377 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF676Q8N7Q3 588 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 MAP6Q96JE9 813 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 CEP19Q96LK0 163 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 OCEL1Q9H607 264 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 B3GAT2Q9NPZ5 323 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 POLE4Q9NR33 117 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 PLEKHB1Q9UF11 243 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 MSRB2Q9Y3D2 182 aa13.92□□□□□ -0.18
HERPUD1-201ENST00000300302 RGS5O15539 181 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 DHHO43323 396 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 ITGB2P05107 769 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 UCHL1P09936 223 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 H2BFMP0C1H6 154 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 BMP4P12644 408 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF24P17028 368 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 LSM6P62312 80 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 CORO6Q6QEF8 472 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 UNQ9370/PRO34162Q6UXP9 181 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 RHOUQ7L0Q8 258 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 ABHD3Q8WU67 409 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 RNF133Q8WVZ7 376 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF775Q96BV0 537 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 C4orf45Q96LM5 186 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 OR14A2Q96R54 314 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 PRRG4Q9BZD6 226 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 NELFAQ9H3P2 528 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 PALMDQ9NP74 551 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 EMC7Q9NPA0 242 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 EMC3Q9P0I2 261 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 UGT2A1Q9Y4X1 527 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 IGKV3D-15A0A087WSY6 115 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 TRAV1-2A0A0B4J238 106 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 SHISA3A0PJX4 238 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 OR4C45A6NMZ5 311 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 TAF4O00268 1085 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 MSR1P21757 451 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 RNFT1Q5M7Z0 435 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 PHYHD1Q5SRE7 291 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 FAM27D1Q5T7N8 215 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 C16orf87Q6PH81 154 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 GPR137CQ8N3F9 429 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 PRSS35Q8N3Z0 413 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 MFSD4AQ8N468 514 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 THRSPQ92748 146 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 TMEM45BQ96B21 275 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 SLAMF6Q96DU3 332 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 RBM24Q9BX46 236 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 PPIL3Q9H2H8 161 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 CENPMQ9NSP4 180 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 GDF2Q9UK05 429 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 LIPGQ9Y5X9 500 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 LHFPL6Q9Y693 200 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 R4GMQ9 66 aa13.91□□□□□ -0.18
HERPUD1-201ENST00000300302 ARPC4-TTLL3A0A0A6YYG9 625 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 A0A1B0GVG6 124 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 SMIM30A4D0T7 59 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 CPN1P15169 458 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF45Q02386 682 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 SGCAQ16586 387 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 Q499Y3 187 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 HSD17B12Q53GQ0 312 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 WDR38Q5JTN6 314 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 SPANXN2Q5MJ10 180 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms