RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 C12orf45Q8N5I9 185 aaPredicted RBP15.91■□□□□ 0.14
GDE1-203ENST00000564172 OR4K17Q8NGC6 315 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 OR11H4Q8NGC9 324 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 PCNPQ8WW12 178 aaKnown RBP15.91■□□□□ 0.14
GDE1-203ENST00000564172 ZNF582Q96NG8 517 aaPredicted RBP15.91■□□□□ 0.14
GDE1-203ENST00000564172 MED28Q9H204 178 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 PTGES2Q9H7Z7 377 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 TRAV36DV7A0A075B6V5 113 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 FABP12A6NFH5 140 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 PDCD5O14737 125 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 GFRA3O60609 400 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 HPGDSO60760 199 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 RNF224P0DH78 156 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 C21orf33P30042 268 aaPredicted RBP15.91■□□□□ 0.14
GDE1-203ENST00000564172 GPX4P36969 197 aaPredicted RBP15.91■□□□□ 0.14
GDE1-203ENST00000564172 CYB561P49447 251 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 FOXF1Q12946 379 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 GXYLT1Q4G148 440 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 ATP1A1-AS1Q5TC04 95 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 C3orf33Q6P1S2 294 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 ATRAIDQ6UW56 229 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 ZNF227Q86WZ6 799 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 LAX1Q8IWV1 398 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 CLEC1AQ8NC01 280 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 STK35Q8TDR2 534 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 UPRTQ96BW1 309 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 MRGPRX4Q96LA9 322 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 ALX4Q9H161 411 aaPredicted RBP15.91■□□□□ 0.14
GDE1-203ENST00000564172 CHRNA9Q9UGM1 479 aa15.91■□□□□ 0.14
GDE1-203ENST00000564172 EML6Q6ZMW3 1958 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 TTLL8A6PVC2 850 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 G3V3Y1 287 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 M0R233 179 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 PPP1R3DO95685 299 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 RLN2P04090 185 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 PRPS1P60891 318 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 C19orf18Q8NEA5 215 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 C1GALT1C1Q96EU7 318 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 DNAJA3Q96EY1 480 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 OR11A1Q9GZK7 315 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 WNT5BQ9H1J7 359 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 FKRPQ9H9S5 495 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 CNOT2Q9NZN8 540 aaKnown RBP15.9■□□□□ 0.14
GDE1-203ENST00000564172 MYEF2Q9P2K5 600 aaKnown RBP15.9■□□□□ 0.14
GDE1-203ENST00000564172 HIF3AQ9Y2N7 669 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 CNTRLQ7Z7A1 2325 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 FAM74A7A6NL05 159 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 SHISA8B8ZZ34 492 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 MCIDASD6RGH6 385 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 BLOC1S5-TXNDC5H3BN57 136 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 DLL1O00548 723 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 BGLAPP02818 100 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 STSP08842 583 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 PEPDP12955 493 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 CALCRP30988 508 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 ST3GAL4Q11206 333 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 SRSF6Q13247 344 aaKnown RBP15.9■□□□□ 0.14
GDE1-203ENST00000564172 FAM74A3Q4VXF1 159 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 KLHL22Q53GT1 634 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 SOWAHCQ53LP3 525 aaPredicted RBP15.9■□□□□ 0.14
GDE1-203ENST00000564172 FAM69AQ5T7M9 428 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 ABHD17BQ5VST6 288 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 C1orf140Q5VVS0 124 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 CD276Q5ZPR3 534 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 BTN2A1Q7KYR7 527 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 POC1BQ8TC44 478 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 CMC2Q9NRP2 79 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 SEC14L4Q9UDX3 406 aa15.9■□□□□ 0.14
GDE1-203ENST00000564172 RPL36Q9Y3U8 105 aaKnown RBP15.9■□□□□ 0.14
GDE1-203ENST00000564172 KDM4EB2RXH2 506 aaPredicted RBP15.89■□□□□ 0.13
GDE1-203ENST00000564172 P04436 131 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 CD96P40200 585 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 AQP2P41181 271 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 OC90Q02509 493 aaPredicted RBP15.89■□□□□ 0.13
GDE1-203ENST00000564172 AADACL4Q5VUY2 407 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 PGAP1Q75T13 922 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 MOSPD2Q8NHP6 518 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 GNRHR2Q96P88 292 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 ERMAPQ96PL5 475 aaPredicted RBP15.89■□□□□ 0.13
GDE1-203ENST00000564172 C1QTNF6Q9BXI9 259 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 HINT3Q9NQE9 182 aaKnown RBP15.89■□□□□ 0.13
GDE1-203ENST00000564172 MED13Q9UHV7 2174 aa15.89■□□□□ 0.13
GDE1-203ENST00000564172 DCDC2BA2VCK2 349 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 C7orf66A4D0T2 115 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 PRODHO43272 600 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 LYRM1O43325 122 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 EFNA2O43921 213 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 NOS3P29474 1203 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 RPL4P36578 427 aaKnown RBP15.88■□□□□ 0.13
GDE1-203ENST00000564172 FCN2Q15485 313 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 RSPO4Q2I0M5 234 aaPredicted RBP15.88■□□□□ 0.13
GDE1-203ENST00000564172 DPY19L2P2Q6ZN68 376 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 ZNF367Q7RTV3 350 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 OR1J4Q8NGS1 313 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 C9orf43Q8TAL5 461 aaPredicted RBP15.88■□□□□ 0.13
GDE1-203ENST00000564172 TMEM41AQ96HV5 264 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 NKX6-2Q9C056 277 aaPredicted RBP15.88■□□□□ 0.13
GDE1-203ENST00000564172 SEBOXQ9HB31 216 aaPredicted RBP15.88■□□□□ 0.13
GDE1-203ENST00000564172 LAMP5Q9UJQ1 280 aa15.88■□□□□ 0.13
GDE1-203ENST00000564172 NKX2-8O15522 239 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms