RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NDUFS8O00217 210 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SOCS2O14508 198 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 IMPA2O14732 288 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ARPC3O15145 178 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 IDH3BO43837 385 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SLC16A7O60669 478 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PTP4A3O75365 173 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 KHDRBS3O75525 346 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 DNAJC8O75937 253 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 SNAP29O95721 258 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 RENP00797 406 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 CST1P01037 141 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 IGHV4-39P01824 125 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 HLA-DQA2P01906 255 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SEMG1P04279 462 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 LCKP06239 509 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 CST2P09228 141 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PATE4P0C8F1 98 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 FAM157BP0CG42 384 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 T-ENOLP0DO92 83 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 RAP2AP10114 183 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ZNF35P13682 527 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SLC25A16P16260 332 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 FUT4P22083 530 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 LAP3P28838 519 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PCSK6P29122 969 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 GCH1P30793 250 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 THBS4P35443 961 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 GLRXP35754 106 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 MAGEA2P43356 314 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 CENPAP49450 140 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 GDI2P50395 445 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 PDLIM4P50479 330 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 HMGA2P52926 109 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 UCP2P55851 309 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PPP2R2BQ00005 443 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 FMODQ06828 376 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SCRN3Q0VDG4 424 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TSPAN31Q12999 210 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TNK1Q13470 666 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 AQP6Q13520 282 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 KRR1Q13601 381 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 FLOT2Q14254 428 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 RAB39AQ14964 217 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SEC23BQ15437 767 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 NKPD1Q17RQ9 610 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SWI5Q1ZZU3 235 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 MICAQ29983 383 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 MST1LQ2TV78 715 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 RFX4Q33E94 735 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 LINC01559Q495D7 138 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PABPC1L2AQ5JQF8 200 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 OR2T5Q6IEZ7 315 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 C11orf71Q6IPW1 123 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 RGS7BPQ6MZT1 257 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 C1orf94Q6P1W5 598 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SLC25A47Q6Q0C1 308 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 B3GLCTQ6Y288 498 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 FAM122BQ7Z309 247 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TSEN54Q7Z6J9 526 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 ZER1Q7Z7L7 766 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SYT9Q86SS6 491 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SPATA24Q86W54 205 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 MEX3DQ86XN8 651 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 KRTAP1-3Q8IUG1 177 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 GLB1L2Q8IW92 636 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 AQP12AQ8IXF9 295 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SVOPLQ8N434 492 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 CLDN22Q8N7P3 220 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 LRRC75AQ8NAA5 344 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 OR2T29Q8NH02 315 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ZNF519Q8TB69 540 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 GNPDA2Q8TDQ7 276 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SNX33Q8WV41 574 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 NEU4Q8WWR8 484 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 HTRA1Q92743 480 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 POM121Q96HA1 1249 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 COX4I2Q96KJ9 171 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 Q96M85 177 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 COG8Q96MW5 612 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ERMAPQ96PL5 475 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 BTBD10Q9BSF8 475 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PIMREGQ9BSJ6 248 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 CHID1Q9BWS9 393 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TEX12Q9BXU0 123 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 REG4Q9BYZ8 158 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SYT4Q9H2B2 425 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 OR52D1Q9H346 318 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 MMADHCQ9H3L0 296 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 ZNF556Q9HAH1 456 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ELOVL3Q9HB03 270 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 DLL4Q9NR61 685 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SLCO1C1Q9NYB5 712 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 FAM53CQ9NYF3 392 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ZNF224Q9NZL3 707 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 REV1Q9UBZ9 1251 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 GDF2Q9UK05 429 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 NDRG4Q9ULP0 352 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 POLR1DQ9Y2S0 133 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 SAMHD1Q9Y3Z3 626 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms