RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CDKN1AP38936 164 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 GSSP48637 474 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 ARHGDIAP52565 204 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 EFNA4P52798 201 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 SNRPD2P62316 118 aaKnown RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 HSF2Q03933 536 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 HGFACQ04756 655 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 FLOT2Q14254 428 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 RAB39AQ14964 217 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 MOGQ16653 247 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 MICAQ29983 383 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 TBC1D28Q2M2D7 210 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 MST1LQ2TV78 715 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 C11orf71Q6IPW1 123 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 DNM1P34Q6PK57 102 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 B3GLCTQ6Y288 498 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 FOXL2NBQ6ZUU3 175 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 BIVMQ86UB2 503 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 LRRC18Q8N456 261 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 SLC30A7Q8NEW0 376 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 OR52L1Q8NGH7 329 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 FBXO17Q96EF6 278 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 CLPTM1LQ96KA5 538 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 Q96MF0 132 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 ERMAPQ96PL5 475 aaPredicted RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 CACNG6Q9BXT2 260 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 BCL2L14Q9BZR8 327 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 RAB1BQ9H0U4 201 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 OR52D1Q9H346 318 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 MS4A5Q9H3V2 200 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 CDH20Q9HBT6 801 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 NOX3Q9HBY0 568 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 IL20Q9NYY1 176 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 VSX1Q9NZR4 365 aaPredicted RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 EIF3KQ9UBQ5 218 aaKnown RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 SLC7A8Q9UHI5 535 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 GPR160Q9UJ42 338 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 ADAM18Q9Y3Q7 739 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 SAMHD1Q9Y3Z3 626 aaKnown RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 UGT2A1Q9Y4X1 527 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 FN1P02751 2386 aaKnown RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 NSD1Q96L73 2696 aaPredicted RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 TEX13CA0A0J9YWL9 993 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 DHRS12A0PJE2 317 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 SLC16A7O60669 478 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 RENP00797 406 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 CST1P01037 141 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 GASTP01350 101 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 MMP7P09237 267 aaPredicted RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 INHBBP09529 407 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 CSF3P09919 207 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 PATE4P0C8F1 98 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 ZNF26P17031 533 aaPredicted RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 TUBG1P23258 451 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 STOMP27105 288 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 LAP3P28838 519 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 CDAP32320 146 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 THBS4P35443 961 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 NUDT6P53370 316 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 UCP2P55851 309 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 LSM6P62312 80 aaKnown RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 FMODQ06828 376 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 SNTB2Q13425 540 aaKnown RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 KRR1Q13601 381 aaKnown RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 ADIPOQQ15848 244 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 CLEC12BQ2HXU8 276 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 PGBD2Q6P3X8 592 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 VHLLQ6RSH7 139 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 ARL9Q6T311 187 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 RASSF6Q6ZTQ3 369 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 JAZF1Q86VZ6 243 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 SPATA24Q86W54 205 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 GLB1L2Q8IW92 636 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 CLDN22Q8N7P3 220 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 OR4C15Q8NGM1 316 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 SPATA3Q8NHX4 192 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 FGFBP3Q8TAT2 258 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 FANK1Q8TC84 345 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 CANT1Q8WVQ1 401 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 C11orf40Q8WZ69 217 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 NABP1Q96AH0 204 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 DOK1Q99704 481 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 MDFIQ99750 246 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 GPA33Q99795 319 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 RHNO1Q9BSD3 238 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 IFT27Q9BW83 186 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 DGCR6LQ9BY27 220 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 PLK3Q9H4B4 646 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 MYOZ1Q9NP98 299 aaPredicted RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 DLL4Q9NR61 685 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 BAIAP2Q9UQB8 552 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 POMPQ9Y244 141 aa7.33□□□□□ -1.24
TPM1-213ENST00000558400 RAI1Q7Z5J4 1906 aaPredicted RBP7.33□□□□□ -1.24
TPM1-213ENST00000558400 IGKV1D-43A0A0B4J1Z2 117 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 A0A1W2PPL8 197 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ARRDC5A6NEK1 342 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms