RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 SPEM2Q0P670 501 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 ISXQ2M1V0 245 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 ELFN2Q5R3F8 820 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 OR5M10Q6IEU7 315 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 RFPL4BQ6ZWI9 263 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 NLRC3Q7RTR2 1065 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 LRRC18Q8N456 261 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 KISS1RQ969F8 398 aaPredicted RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TMEM106AQ96A25 262 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TRIB1Q96RU8 372 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 VN1R1Q9GZP7 353 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 QPCTLQ9NXS2 382 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 GPR55Q9Y2T6 319 aaPredicted RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 LTBP1Q14766 1721 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PSME4Q14997 1843 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 LOC100509620A0A075B734 347 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 FAM166BA8MTA8 275 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 J3QRK9 145 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TPPPO94811 219 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PAHP00439 452 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 CD1EP15812 388 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TUBG1P23258 451 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 ZNF81P51508 661 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 SUB1P53999 127 aaKnown RBP eCLIP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 LGALS4P56470 323 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 CLDN15P56746 228 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 P2RY14Q15391 338 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PNLIPRP3Q17RR3 467 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PRAMEF9Q5VWM5 478 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 GFRALQ6UXV0 394 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TMEM151AQ8N4L1 468 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 SIRT6Q8N6T7 355 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PATE1Q8WXA2 126 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 C10orf35Q96D05 121 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 ATF6BQ99941 703 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 ZNF385DQ9H6B1 395 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 LHX9Q9NQ69 397 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TUBG2Q9NRH3 451 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 REV1Q9UBZ9 1251 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TRPM7Q96QT4 1865 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 HMX3A6NHT5 357 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PPM1DO15297 605 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PRKRAO75569 313 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 SBK3P0C264 359 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TPT1P13693 172 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 GABRA2P47869 451 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 RPS27AP62979 156 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 UBA52P62987 128 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 HBG1P69891 147 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 HBG2P69892 147 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 RPL18Q07020 188 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 SPOCK1Q08629 439 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 FOXC1Q12948 553 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PRICKLE4Q2TBC4 344 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 PAN3Q58A45 887 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 GDPD3Q7L5L3 318 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 OR1M1Q8NGA1 313 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 OR52N5Q8NH56 324 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 ASB5Q8WWX0 329 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 SPSB1Q96BD6 273 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 FCRL1Q96LA6 429 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 FBXL4Q9UKA2 621 aa8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 COA3Q9Y2R0 106 aaPredicted RBP8.41□□□□□ -1.06
PPFIA2-216ENST00000549396 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 A0A0B4J2E0 115 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 A0A1B0GX12 115 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 PAQR6Q6TCH4 344 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TFAP2EQ6VUC0 442 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 LINC00346Q8IVM7 164 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 PDZD9Q8IXQ8 264 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 CMTM4Q8IZR5 234 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 APOBEC4Q8WW27 367 aaKnown RBP8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 SARGQ9BW04 601 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TXNL4BQ9NX01 149 aaKnown RBP8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 SLCO1C1Q9NYB5 712 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 EHFQ9NZC4 300 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 PIGLQ9Y2B2 252 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 SMCO3A2RU48 225 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 M0R135 149 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TGM4P49221 684 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 BTG2P78543 158 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 SOWAHCQ53LP3 525 aaPredicted RBP8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 HES3Q5TGS1 186 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 DRAM2Q6UX65 266 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 NANPQ8TBE9 248 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TAAR8Q969N4 342 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 ZNF799Q96GE5 643 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 ST6GALNAC5Q9BVH7 336 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 SLC38A1Q9H2H9 487 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 MMP25Q9NPA2 562 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 SLC25A37Q9NYZ2 338 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 VSX1Q9NZR4 365 aaPredicted RBP8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TRAPPC2P0DI81 140 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 TRAPPC2BP0DI82 140 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 CXADRP78310 365 aa8.4□□□□□ -1.06
PPFIA2-216ENST00000549396 ACER2Q5QJU3 275 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms