RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 GNB1P62873 340 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 CDKL1Q00532 357 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 NDUFAF6Q330K2 333 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 MS4A18Q3C1V0 323 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 PIGGQ5H8A4 983 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
CD44-220ENST00000525688 CTRB2Q6GPI1 263 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 METTL7BQ6UX53 244 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 TMEM156Q8N614 296 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 OR5T2Q8NGG2 359 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 OR8K1Q8NGG5 319 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 DTD1Q8TEA8 209 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 RNF133Q8WVZ7 376 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 C18orf25Q96B23 403 aaPredicted RBP3.98□□□□□ -1.77
CD44-220ENST00000525688 ZNF501Q96CX3 271 aaPredicted RBP3.98□□□□□ -1.77
CD44-220ENST00000525688 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 ZFP3Q96NJ6 502 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 NEDD4LQ96PU5 975 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 ERGIC2Q96RQ1 377 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 CIB1Q99828 191 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 APOL2Q9BQE5 337 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 RSG1Q9BU20 258 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 RPP25Q9BUL9 199 aaKnown RBP3.98□□□□□ -1.77
CD44-220ENST00000525688 ZNF426Q9BUY5 554 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 SLITRK2Q9H156 845 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 SLC25A51Q9H1U9 297 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 PIGUQ9H490 435 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 GDF3Q9NR23 364 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 SIGLEC8Q9NYZ4 499 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 SLC6A5Q9Y345 797 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 CACNG2Q9Y698 323 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 CDH10Q9Y6N8 788 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 V9GYQ6 96 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 PLXNA1Q9UIW2 1896 aa3.98□□□□□ -1.77
CD44-220ENST00000525688 KLF18A0A0U1RQI7 1052 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 FAM74A7A6NL05 159 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 PFKFB2O60825 505 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 DUSP11O75319 330 aaKnown RBP3.97□□□□□ -1.77
CD44-220ENST00000525688 ZNF432O94892 652 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 PLEKHA8P1O95397 391 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 TSPAN13O95857 204 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 F10P00742 488 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 IGHG3P01860 377 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 HMGN1P05114 100 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 GIMD1P0DJR0 217 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 ADORA3P0DMS8 318 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 MYOGP15173 224 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 NPR2P20594 1047 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 CMA1P23946 247 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 IVDP26440 423 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 CALML3P27482 149 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 CALCRP30988 508 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 CX3CR1P49238 355 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 RGS6P49758 472 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 PAX2Q02962 417 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 BNIP2Q12982 314 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 NAB1Q13506 487 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR4D1Q15615 310 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 TSC22D1Q15714 1073 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 KLHL38Q2WGJ6 581 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 COX19Q49B96 90 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 FAM106AQ4KMX7 169 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 FAM74A3Q4VXF1 159 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 TP53I3Q53FA7 332 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 ATP1A1-AS1Q5TC04 95 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 C3P1Q6ZMU1 363 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 MBOAT1Q6ZNC8 495 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 Q6ZSR3 168 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 LANCL3Q6ZV70 420 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 SETD3Q86TU7 594 aaPredicted RBP3.97□□□□□ -1.77
CD44-220ENST00000525688 TAC4Q86UU9 113 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 GID4Q8IVV7 300 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 SPAG16Q8N0X2 631 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 CENPSQ8N2Z9 138 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 TRAM1L1Q8N609 369 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR10A7Q8NGE5 316 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR4D10Q8NGI6 311 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR13C5Q8NGS8 318 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 PLPPR1Q8TBJ4 325 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 ISOC2Q96AB3 205 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OMA1Q96E52 524 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 C2orf48Q96LS8 159 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR5B2Q96R09 309 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 CNN2Q99439 309 aaKnown RBP3.97□□□□□ -1.77
CD44-220ENST00000525688 MAPKAP1Q9BPZ7 522 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 ECSITQ9BQ95 431 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 DCUN1D5Q9BTE7 237 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 OR51M1Q9H341 326 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 IKZF5Q9H5V7 419 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 POPDC2Q9HBU9 364 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 VCX3AQ9NNX9 186 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 MAT2BQ9NZL9 334 aa3.97□□□□□ -1.77
CD44-220ENST00000525688 KLRF1Q9NZS2 232 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms