RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CREB3L2Q70SY1 520 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 KRT77Q7Z794 578 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 GGNQ86UU5 652 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 OR10H5Q8NGA6 315 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 RNF128Q8TEB7 428 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 AGAP4Q96P64 663 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 DCBLD2Q96PD2 775 aa19.59■□□□□ 0.73
PTPN13-205ENST00000502971 SF3B5Q9BWJ5 86 aaKnown RBP19.59■□□□□ 0.73
PTPN13-205ENST00000502971 TMEM212A6NML5 194 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 ZNF879B4DU55 563 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 NPIPA2E9PIF3 369 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 NPIPA3F8WFD2 350 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 GFRA1P56159 465 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 CLDN20P56880 219 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 ATP1A1-AS1Q5TC04 95 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 OR9K2Q8NGE7 335 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 C11orf40Q8WZ69 217 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 KCTD12Q96CX2 325 aaKnown RBP19.58■□□□□ 0.72
PTPN13-205ENST00000502971 OR14A2Q96R54 314 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 SRXN1Q9BYN0 137 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 COMMD4Q9H0A8 199 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 MIXL1Q9H2W2 232 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 ZNF703Q9H7S9 590 aaPredicted RBP19.58■□□□□ 0.72
PTPN13-205ENST00000502971 KLF13Q9Y2Y9 288 aaPredicted RBP19.58■□□□□ 0.72
PTPN13-205ENST00000502971 UGT2A1Q9Y4X1 527 aa19.58■□□□□ 0.72
PTPN13-205ENST00000502971 OR5H15A6NDH6 313 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 OR4C45A6NMZ5 311 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 EIF1AYO14602 144 aaKnown RBP19.57■□□□□ 0.72
PTPN13-205ENST00000502971 ZNF254O75437 659 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 HPNP05981 417 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 POU3F2P20265 443 aaPredicted RBP19.57■□□□□ 0.72
PTPN13-205ENST00000502971 CCR9P51686 369 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 RIDAP52758 137 aaKnown RBP19.57■□□□□ 0.72
PTPN13-205ENST00000502971 CARD18P57730 90 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 IFITM3Q01628 133 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 HSD17B12Q53GQ0 312 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 ZNF544Q6NX49 715 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 DEGS2Q6QHC5 323 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 MDS2Q8NDY4 140 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 OR2V1Q8NHB1 315 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 CHPT1Q8WUD6 406 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 MCHR2Q969V1 340 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 UCN2Q96RP3 112 aa19.57■□□□□ 0.72
PTPN13-205ENST00000502971 ARPC4-TTLL3A0A0A6YYG9 625 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 IGHV3-15A0A0B4J1V0 119 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 SP1P08047 785 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 RAB3BP20337 219 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 ENPP1P22413 925 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 CARD17Q5XLA6 110 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 SLC25A25Q6KCM7 469 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 VASH2Q86V25 355 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 NR2C2APQ86WQ0 139 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 ST7LQ8TDW4 575 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 RGP1Q92546 391 aaPredicted RBP19.56■□□□□ 0.72
PTPN13-205ENST00000502971 ADGRG7Q96K78 797 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 C4orf45Q96LM5 186 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 CCDC32Q9BV29 185 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 ISPDA4D126 451 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 NME2P1O60361 137 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 NME2P22392 152 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 MAPK3P27361 379 aaPredicted RBP19.56■□□□□ 0.72
PTPN13-205ENST00000502971 Q499Y3 187 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 Q6ZNX1 250 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 DCXRQ7Z4W1 244 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 PRSS35Q8N3Z0 413 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 SLC39A7Q92504 469 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 HES7Q9BYE0 225 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 COMMD3Q9UBI1 195 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 V9GYH0 126 aa19.56■□□□□ 0.72
PTPN13-205ENST00000502971 TRBV5-5A0A0J9YX44 114 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 A0A1W2PPL8 197 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 SMAD9O15198 467 aaKnown RBP19.55■□□□□ 0.72
PTPN13-205ENST00000502971 QDPRP09417 244 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 FOXC1Q12948 553 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 MFAP5Q13361 173 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 PDSS1Q5T2R2 415 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 IDNKQ5T6J7 187 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 SFXN4Q6P4A7 337 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 ZNF676Q8N7Q3 588 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 TMEM54Q969K7 222 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 INTS12Q96CB8 462 aaKnown RBP19.55■□□□□ 0.72
PTPN13-205ENST00000502971 DIRAS2Q96HU8 199 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 DERL3Q96Q80 235 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 TTTY12Q9BZ98 90 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 NOX4Q9NPH5 578 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 CYB5R1Q9UHQ9 305 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 ADAM30Q9UKF2 790 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 LRP12Q9Y561 859 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 NCKAP5O14513 1909 aa19.55■□□□□ 0.72
PTPN13-205ENST00000502971 A0A0G2JK05 382 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 TRABD2BA6NFA1 517 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 H0YC42 278 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 KLRC4-KLRK1H3BQV0 150 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 TBX1O43435 398 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 CD46P15529 392 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 SUCLG1P53597 346 aaKnown RBP19.54■□□□□ 0.72
PTPN13-205ENST00000502971 KCNMB1Q16558 191 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 WDR38Q5JTN6 314 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 SNX29P2Q8IUI4 249 aa19.54■□□□□ 0.72
PTPN13-205ENST00000502971 LINC00346Q8IVM7 164 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms