RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RIDAP52758 137 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 RRADP55042 308 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 H3F3AP84243 136 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 INSL4Q14641 139 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 SLC17A1Q14916 467 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 PCK2Q16822 640 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 HSD17B12Q53GQ0 312 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 XKRXQ6PP77 449 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 NHLRC1Q6VVB1 395 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 ASB18Q6ZVZ8 466 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 LYSMD2Q8IV50 215 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 GDPD1Q8N9F7 314 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 OR52N5Q8NH56 324 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 RNF128Q8TEB7 428 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 PNPLA2Q96AD5 504 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 UBL7Q96S82 380 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 PDCD1LG2Q9BQ51 273 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 OR2B2Q9GZK3 357 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 RNF32Q9H0A6 362 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 ABCB10Q9NRK6 738 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 ANKRD10Q9NXR5 420 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 COMMD3Q9UBI1 195 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 MRPS18BQ9Y676 258 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A096LPE4 126 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SHISA3A0PJX4 238 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 NOTOA8MTQ0 251 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 CDRT15L2A8MXV6 281 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PSMD9O00233 223 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ZFPL1O95159 310 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 OPN1LWP04000 364 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 RAF1P04049 648 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PGA4P0DJD7 388 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PGA3P0DJD8 388 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 LAP3P28838 519 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 CD96P40200 585 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 AGFG1P52594 562 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 RPS11P62280 158 aaKnown RBP eCLIP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 OXA1LQ15070 435 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ETFDHQ16134 617 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 MEP1BQ16820 701 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 Q499Y3 187 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PDSS1Q5T2R2 415 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 IDNKQ5T6J7 187 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SFXN4Q6P4A7 337 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 IGF2-ASQ6U949 168 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM131AQ6UXB0 335 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ESPNLQ6ZVH7 1005 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 DTX1Q86Y01 620 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF676Q8N7Q3 588 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM169BQ8N8A8 192 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PRSS33Q8NF86 280 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 OR2G2Q8NGZ5 317 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SETD6Q8TBK2 473 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 GPR148Q8TDV2 347 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 INTS12Q96CB8 462 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 OR14A2Q96R54 314 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 MRI1Q9BV20 369 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ABHD6Q9BV23 337 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SF3B5Q9BWJ5 86 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 MIXL1Q9H2W2 232 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SP140LQ9H930 580 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ELOVL3Q9HB03 270 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 FAIMQ9NVQ4 179 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SLCO1C1Q9NYB5 712 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ABRACLQ9P1F3 81 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 IL17BQ9UHF5 180 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PCSK5Q92824 1860 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SPAARA0A1B0GVQ0 90 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SMIM30A4D0T7 59 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 LRRC3CA6NJW4 275 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PRR32B1ATL7 298 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 NPIPA2E9PIF3 369 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 NPIPA3F8WFD2 350 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 NCR1O76036 304 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 GPANK1O95872 356 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PTTG1O95997 202 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 APOA1P02647 267 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 GDF1P27539 372 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 TALDO1P37837 337 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 GUCA1AP43080 201 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 CD97P48960 835 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 PSMD7P51665 324 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 CAV3P56539 151 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 RAC3P60763 192 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 IFITM3Q01628 133 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 NHLH1Q02575 133 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 FMODQ06828 376 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF227Q86WZ6 799 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 LRRC28Q86X40 367 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM83FQ8NEG4 500 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 MAP6Q96JE9 813 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 C4orf45Q96LM5 186 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 SFXN2Q96NB2 322 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 EMC6Q9BV81 110 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms