RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 A0A087WZY1 265 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 A0A1W2PQF6 199 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 PRICKLE3O43900 615 aaPredicted RBP10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SPI1P17947 270 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SDHAP31040 664 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 KIR2DL3P43628 341 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 DIO1P49895 249 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 FAM76BQ5HYJ3 339 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 HMGCLL1Q8TB92 370 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 MED29Q9NX70 200 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 PCDHGA5Q9Y5G8 931 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 A0A1B0GTQ1 180 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CEBPZOSA8MTT3 80 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 C1QAP02745 245 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF83P51522 516 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 MAP2K6P52564 334 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 TAS2R19P59542 299 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CYCSP99999 105 aaKnown RBP10.54□□□□□ -0.72
SYNE1-204ENST00000367248 KIAA0040Q15053 153 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 ACSM5Q6NUN0 579 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SLC22A24Q8N4F4 322 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 OR52I1Q8NGK6 324 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CD300LFQ8TDQ1 290 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 RNF170Q96K19 258 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 ASH2LQ9UBL3 628 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 OSGIN1Q9UJX0 560 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 TOX3O15405 576 aaPredicted RBP10.54□□□□□ -0.72
SYNE1-204ENST00000367248 UPK1BO75841 260 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SOX8P57073 446 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 HACD4Q5VWC8 232 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 KIRREL2Q6UWL6 708 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 OR4N2Q8NGD1 307 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 OR6M1Q8NGM8 313 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 UBE2FQ969M7 185 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF681Q96N22 645 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 TXNL4BQ9NX01 149 aaKnown RBP10.54□□□□□ -0.72
SYNE1-204ENST00000367248 MCRIP1C9JLW8 97 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 CPT2P23786 658 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 ZMAT1Q5H9K5 638 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 OR52W1Q6IF63 320 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 RNF32Q9H0A6 362 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 GABARAPL1Q9H0R8 117 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 RPH3ALQ9UNE2 315 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 TIMM10BQ9Y5J6 103 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 KCNE1BA0A087WTH5 132 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 HOXD12P35452 270 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 METTL11BQ5VVY1 283 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 PRAMEF9Q5VWM5 478 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF425Q6IV72 752 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 CLDN22Q8N7P3 220 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 MYOTQ9UBF9 498 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF346Q9UL40 294 aaKnown RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 NUBP2Q9Y5Y2 271 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 TMEM129A0AVI4 362 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 SPRY3O43610 288 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 TK1P04183 234 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 CRYBA1P05813 215 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 CLN3Q13286 438 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 EMC4Q5J8M3 183 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 IGFBP1P08833 259 aaPredicted RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 DEFA4P12838 97 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 NAGAP17050 411 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 VEGFCP49767 419 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 CAV3P56539 151 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 RPS23P62266 143 aaKnown RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 SYT6Q5T7P8 510 aaPredicted RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 RNF165Q6ZSG1 346 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 EMG1Q92979 244 aaKnown RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 SLC22A11Q9NSA0 550 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 STEAP1Q9UHE8 339 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 RCE1Q9Y256 329 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 A3GALT2U3KPV4 340 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 HIST1H1CP16403 213 aaKnown RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 ACHEP22303 614 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 MRPL19P49406 292 aaKnown RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 EMDP50402 254 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 ADPRMQ3LIE5 342 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 SFXN4Q6P4A7 337 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 FGGYQ96C11 551 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 OXGR1Q96P68 337 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 KCNE3Q9Y6H6 103 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 TRDV1A0A1B0GX56 115 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 TCRBV5S2A0A599 114 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 DEFA5Q01523 94 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 RIMKLAQ8IXN7 391 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 FAM83FQ8NEG4 500 aaPredicted RBP10.53□□□□□ -0.72
SYNE1-204ENST00000367248 PTTG3PQ9NZH4 202 aa10.53□□□□□ -0.72
SYNE1-204ENST00000367248 HMX3A6NHT5 357 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF732B4DXR9 585 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 B4GALT1P15291 398 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 CX3CR1P49238 355 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 C3AR1Q16581 482 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 SULF2Q8IWU5 870 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms