RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TUSC1Q2TAM9 212 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF684Q5T5D7 378 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CDCP2Q5VXM1 449 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ULK3Q6PHR2 472 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 STAC2Q6ZMT1 411 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 GATSQ8NAP1 163 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 DNAAF1Q8NEP3 725 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 OR1N1Q8NGS0 311 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 PMM1Q92871 262 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CXorf58Q96LI9 332 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 SEMA4CQ9C0C4 833 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 MFSD2BA6NFX1 497 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 PYCARD-AS1I3L0S3 204 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ADAM10O14672 748 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 TSPAN4O14817 238 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 SULT1B1O43704 296 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ALOX12BO75342 701 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 SERPINI2O75830 405 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 RPP14O95059 124 aaKnown RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 NDUFB6O95139 128 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 HEXBP07686 556 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 NMBP08949 121 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ATF4P18848 351 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 PPICP45877 212 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 NR0B1P51843 470 aaKnown RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 RAP2BP61225 183 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ERVK-25P63136 954 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 OC90Q02509 493 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 LGALS3BPQ08380 585 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 PLA2G7Q13093 441 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CBFBQ13951 182 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 LINC01590Q5TEZ4 76 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 RGS7BPQ6MZT1 257 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 DPY19L2P2Q6ZN68 376 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF441Q8N8Z8 693 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 MIB2Q96AX9 1013 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 SGTBQ96EQ0 304 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF578Q96N58 590 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 TSSK2Q96PF2 358 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 UTP23Q9BRU9 249 aaKnown RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 NMNAT2Q9BZQ4 307 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 SLC26A1Q9H2B4 701 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 PPA2Q9H2U2 334 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 Q9N2J8 555 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 POLE3Q9NRF9 147 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ING1Q9UK53 422 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-204ENST00000353317 OR10H1Q9Y4A9 318 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 LOXL2Q9Y4K0 774 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 FREM3P0C091 2139 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 C9orf172C9J069 976 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ACOT7O00154 380 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ARPC5O15511 151 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 SUSD5O60279 629 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 RAB40ALP0C0E4 278 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ZP3P21754 424 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 SOX2P48431 317 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 MECP2P51608 486 aaKnown RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 EMP2P54851 167 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 H2BFSP57053 126 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 TAS2R20P59543 309 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 RPS18P62269 152 aaKnown RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ZNHIT3Q15649 155 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 C2orf68Q2NKX9 166 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM81Q6P7N7 255 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 CBLN3Q6UW01 205 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ALKAL2Q6UX46 152 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 KCTD20Q7Z5Y7 419 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 DND1Q8IYX4 353 aaKnown RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF511Q8NB15 262 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 LHFPL5Q8TAF8 219 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 RAB40AQ8WXH6 277 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 Q96M85 177 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 SLC46A1Q96NT5 459 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ADOQ96SZ5 270 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 TMPRSS13Q9BYE2 586 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 SPRY4Q9C004 299 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 WWTR1Q9GZV5 400 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 FOXJ2Q9P0K8 574 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 PTPRBP23467 1997 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 FRYQ5TBA9 3013 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 OR6C65A6NJZ3 312 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 SNRPGP15A8MWD9 76 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ARPC3O15145 178 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 BET1O15155 118 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 SIX6O95475 246 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 IL5P05113 134 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 OR8G3PP0DMU2 310 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 VSIG10L2P0DP72 767 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 CALCBP10092 127 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 C4BPBP20851 252 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 CDKN2AP42771 156 aaKnown RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ART1P52961 327 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 MRPS10P82664 201 aaKnown RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 BAMBIQ13145 260 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 BIKQ13323 160 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 BTN1A1Q13410 526 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 HLXQ14774 488 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF141Q15928 474 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 KLHL26Q53HC5 615 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms