RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ATP1B3P54709 279 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 OR2Y1Q8NGV0 311 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 UBE2FQ969M7 185 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 OR5B12Q96R08 314 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 RAB9BQ9NP90 201 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 IGHV5-10-1A0A0J9YXX1 117 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 FITM1A5D6W6 292 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 ANKRD30BLA7E2S9 258 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 F5H5K5 113 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 H7C1Q1 480 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 RRP8O43159 456 aaKnown RBP11.04□□□□□ -0.64
SMAD9-201ENST00000350148 RAB3DO95716 219 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 UBBP0CG47 229 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 IFNGR1P15260 489 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 ARSBP15848 533 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 MEF2DQ14814 521 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 SVBPQ8N300 66 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 OR6S1Q8NH40 331 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 BEX1Q9HBH7 125 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 LRFN1Q9P244 771 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 ZNF814B7Z6K7 855 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 ADH6P28332 368 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 CEBPEQ15744 281 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 RNASE10Q5GAN6 216 aaKnown RBP11.04□□□□□ -0.64
SMAD9-201ENST00000350148 SIGIRRQ6IA17 410 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 OR4N2Q8NGD1 307 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 AKR7LQ8NHP1 331 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 CPT1CQ8TCG5 803 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 TAAR8Q969N4 342 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 MYOTQ9UBF9 498 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 GREB1Q4ZG55 1949 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 IFNA2P01563 188 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 ETV6P41212 452 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 ALDH3B1P43353 468 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 LSSP48449 732 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 PWWP2BQ6NUJ5 590 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 BEND4Q6ZU67 534 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 FAM71F1Q96KD3 344 aaPredicted RBP11.04□□□□□ -0.64
SMAD9-201ENST00000350148 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 MMP25Q9NPA2 562 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 MAN2C1Q9NTJ4 1040 aa11.04□□□□□ -0.64
SMAD9-201ENST00000350148 MAKP20794 623 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ZMAT1Q5H9K5 638 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 FAM173AQ9BQD7 235 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 CACNG6Q9BXT2 260 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 COL4A6Q14031 1691 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 BDKRB2P30411 391 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 PSG6Q00889 435 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ZNF117Q03924 483 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 MEP1BQ16820 701 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 LYSMD2Q8IV50 215 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
SMAD9-201ENST00000350148 CLEC2DQ9UHP7 191 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 EXOGQ9Y2C4 368 aaKnown RBP11.03□□□□□ -0.64
SMAD9-201ENST00000350148 PTPRDP23468 1912 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 DOCK4Q8N1I0 1966 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 A0A1B0GVC2 190 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 K7EPK0 472 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 TOR1AO14656 332 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 AKR7A3O95154 331 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 TMEM225BP0DP42 221 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 CD79AP11912 226 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 MYF5P13349 255 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 AMY2BP19961 511 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 COL19A1Q14993 1142 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ARTNQ5T4W7 220 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 SFXN4Q6P4A7 337 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 LINC00696Q6ZRV3 163 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 SYNPRQ8TBG9 265 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ARL11Q969Q4 196 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 OR52A1Q9UKL2 312 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 NLRC5Q86WI3 1866 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 TRAV18A0A075B6X5 111 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 SLC37A1P57057 533 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ATXN7L3Q14CW9 347 aaPredicted RBP11.03□□□□□ -0.64
SMAD9-201ENST00000350148 GALNTL5Q7Z4T8 443 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 ZNF511Q8NB15 262 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
SMAD9-201ENST00000350148 H7C1C5 153 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 M6PRP20645 277 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 LAP3P28838 519 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 LCN6P62502 163 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 GK2Q14410 553 aaPredicted RBP11.02□□□□□ -0.64
SMAD9-201ENST00000350148 OR8S1Q8NH09 359 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 NANPQ8TBE9 248 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 THAP7Q9BT49 309 aaPredicted RBP11.02□□□□□ -0.64
SMAD9-201ENST00000350148 ICAM5Q9UMF0 924 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 HMX3A6NHT5 357 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 H3BSH0 61 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 ZNF883P0CG24 379 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 CALCBP10092 127 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 TAS2R31P59538 309 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 SOWAHCQ53LP3 525 aaPredicted RBP11.02□□□□□ -0.64
SMAD9-201ENST00000350148 ACTBL2Q562R1 376 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms