RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GLO1Q04760 184 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 TAF11Q15544 211 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 PCGF3Q3KNV8 242 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 THEM4Q5T1C6 240 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 C10orf128Q5T292 105 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 USP43Q70EL4 1123 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 C1orf174Q8IYL3 243 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 CLDN22Q8N7P3 220 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 OR51F2Q8NH61 342 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 AKR7LQ8NHP1 331 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 ZNF519Q8TB69 540 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 ZNF418Q8TF45 676 aaPredicted RBP10.63□□□□□ -0.71
SGCA-202ENST00000344627 TSPAN32Q96QS1 320 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 KCTD14Q9BQ13 255 aaPredicted RBP10.63□□□□□ -0.71
SGCA-202ENST00000344627 ELAC2Q9BQ52 826 aaKnown RBP10.63□□□□□ -0.71
SGCA-202ENST00000344627 ALG12Q9BV10 488 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 BCL2L14Q9BZR8 327 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 HINT3Q9NQE9 182 aaKnown RBP10.63□□□□□ -0.71
SGCA-202ENST00000344627 SLCO1C1Q9NYB5 712 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 NKIRAS2Q9NYR9 191 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 HIF3AQ9Y2N7 669 aa10.63□□□□□ -0.71
SGCA-202ENST00000344627 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 C5orf49A4QMS7 147 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 HTR3EA5X5Y0 456 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 A6NIZ1 184 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 NME4O00746 187 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 CDC14BO60729 498 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 GMNNO75496 209 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 MT-ND5P03915 603 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 MMP7P09237 267 aaPredicted RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 NCK1P16333 377 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 ZNF32P17041 273 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 FUT4P22083 530 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 GCH1P30793 250 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 MAGEB1P43366 347 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 GSK3BP49841 420 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 RAP1BP61224 184 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 RAP1AP62834 184 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 MRPS34P82930 218 aaKnown RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 PRKCDQ05655 676 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 TSTQ16762 297 aaKnown RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 SPATA46Q5T0L3 261 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 SLC25A47Q6Q0C1 308 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 TBPL2Q6SJ96 375 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 UNQ6126/PRO20091Q6UXV3 157 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 ALDH16A1Q8IZ83 802 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 OFCC1Q8IZS5 231 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 CPEB3Q8NE35 698 aaKnown RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 OR13C2Q8NGS9 318 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 ACOT11Q8WXI4 607 aaPredicted RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 TMEM186Q96B77 213 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 HSH2DQ96JZ2 352 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 SEPHS2Q99611 448 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 NDEL1Q9GZM8 345 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 FAM107BQ9H098 131 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 RACGAP1Q9H0H5 632 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 SMURF2Q9HAU4 748 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 DECR2Q9NUI1 292 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 FAM32AQ9Y421 112 aaKnown RBP10.62□□□□□ -0.71
SGCA-202ENST00000344627 UGT2A1Q9Y4X1 527 aa10.62□□□□□ -0.71
SGCA-202ENST00000344627 NPIPB13A6NJU9 1138 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 C17orf100A8MU93 164 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 NPIPB4C9JG80 1138 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 H7C1C5 153 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 NDUFAB1O14561 156 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 XKRYO14609 159 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 SNAP29O95721 258 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 MSMBP08118 114 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 TSPAN19P0C672 248 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 ZNF250P15622 560 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 GATA3P23771 443 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 LAP3P28838 519 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 LIMS1P48059 325 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 COMPP49747 757 aaPredicted RBP10.61□□□□□ -0.71
SGCA-202ENST00000344627 ZNF133P52736 654 aaPredicted RBP10.61□□□□□ -0.71
SGCA-202ENST00000344627 LCN6P62502 163 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 CCL8P80075 99 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 PSG4Q00888 419 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 FAM205BPQ63HN1 556 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 SHQ1Q6PI26 577 aaKnown RBP10.61□□□□□ -0.71
SGCA-202ENST00000344627 MBOAT2Q6ZWT7 520 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 CBLL1Q75N03 491 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 TREML1Q86YW5 311 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 RNF113BQ8IZP6 322 aaKnown RBP10.61□□□□□ -0.71
SGCA-202ENST00000344627 FNDC8Q8TC99 324 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 YIPF5Q969M3 257 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 NABP1Q96AH0 204 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 CMTM5Q96DZ9 223 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 RERGLQ9H628 205 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 LPAR2Q9HBW0 351 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 MAN2C1Q9NTJ4 1040 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 ADA2Q9NZK5 511 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 GRHPRQ9UBQ7 328 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 EGFL7Q9UHF1 273 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 415.8 ms