RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GSG1Q2KHT4 349 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 RRM2BQ7LG56 351 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 CCDC36Q8IYA8 594 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 OR4Q3Q8NH05 313 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 FAM81AQ8TBF8 368 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 GNPDA2Q8TDQ7 276 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 FOXN4Q96NZ1 517 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 NIPSNAP1Q9BPW8 284 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 SIAEQ9HAT2 523 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
VEGFA-201ENST00000230480 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 LOC100509620A0A075B734 347 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 OR6C68A6NDL8 312 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 SOCS2O14508 198 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 FKBP6O75344 327 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 SERPINA5P05154 406 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 PSKH1P11801 424 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 CCL2P13500 99 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 HIST1H1CP16403 213 aaKnown RBP11.85□□□□□ -0.51
VEGFA-201ENST00000230480 ZNF32P17041 273 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 NR4A1P22736 598 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 LAP3P28838 519 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 RPL4P36578 427 aaKnown RBP11.85□□□□□ -0.51
VEGFA-201ENST00000230480 PSG4Q00888 419 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 NPRL3Q12980 569 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 KRR1Q13601 381 aaKnown RBP11.85□□□□□ -0.51
VEGFA-201ENST00000230480 FAM98BQ52LJ0 330 aaKnown RBP11.85□□□□□ -0.51
VEGFA-201ENST00000230480 FAM205BPQ63HN1 556 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 OR6V1Q8N148 313 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 LRRC18Q8N456 261 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 NPEPL1Q8NDH3 523 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 TMEM171Q8WVE6 324 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 STMN2Q93045 179 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 PERPQ96FX8 193 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 DUS3LQ96G46 650 aaKnown RBP11.85□□□□□ -0.51
VEGFA-201ENST00000230480 DGCR6LQ9BY27 220 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 WNT5BQ9H1J7 359 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 SYT4Q9H2B2 425 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 EMC7Q9NPA0 242 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 POLE4Q9NR33 117 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 NDUFA13Q9P0J0 144 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 ATP23Q9Y6H3 246 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
VEGFA-201ENST00000230480 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
VEGFA-201ENST00000230480 NSD1Q96L73 2696 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 A6NIZ1 184 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 GPRIN2O60269 458 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 SMPD2O60906 423 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 CCNB2O95067 398 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 GAAP10253 952 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 PRKACGP22612 351 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 APOBEC3AP31941 199 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 RAP1BP61224 184 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 RAP1AP62834 184 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 CD47Q08722 323 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 FLOT2Q14254 428 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 GPR139Q6DWJ6 353 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 ZNF544Q6NX49 715 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 CD300LDQ6UXZ3 194 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 RASSF6Q6ZTQ3 369 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 AQP11Q8NBQ7 271 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 NUP37Q8NFH4 326 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 ERMAPQ96PL5 475 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 RBP7Q96R05 134 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 NMNAT3Q96T66 252 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 FEVQ99581 238 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 ZNF184Q99676 751 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 DOK1Q99704 481 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 ZNF416Q9BWM5 594 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 CA10Q9NS85 328 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 CBLN4Q9NTU7 201 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 GRHPRQ9UBQ7 328 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
VEGFA-201ENST00000230480 CDH10Q9Y6N8 788 aa11.84□□□□□ -0.51
VEGFA-201ENST00000230480 ZFHX3Q15911 3703 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 UBL3O95164 117 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 CST1P01037 141 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 CRYAAP02489 173 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 TFP02787 698 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 WNT5AP41221 380 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 CAPZA2P47755 286 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 RCN1Q15293 331 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 KCNMB1Q16558 191 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 SGCAQ16586 387 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 PABPC1L2AQ5JQF8 200 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 Q5PR19 223 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 LRP11Q86VZ4 500 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 SPATA24Q86W54 205 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 MUC15Q8N387 334 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 OR4K13Q8NH42 304 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 AKR7LQ8NHP1 331 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 POM121L2Q96KW2 1035 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 FN3KQ9H479 309 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms