RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C HMG1P12683 1054 aa5.72□□□□□ -1.49
RPN8YOR261C YBR259WP38338 688 aa5.72□□□□□ -1.49
RPN8YOR261C MIP6P38760 659 aaKnown RBP5.72□□□□□ -1.49
RPN8YOR261C MUP1P50276 574 aa5.72□□□□□ -1.49
RPN8YOR261C UBC9P50623 157 aaPredicted RBP5.72□□□□□ -1.49
RPN8YOR261C YKR018CP36114 725 aa5.71□□□□□ -1.5
RPN8YOR261C SUL1P38359 859 aa5.71□□□□□ -1.5
RPN8YOR261C MGS1P40151 587 aa5.71□□□□□ -1.5
RPN8YOR261C RPN7Q06103 429 aaKnown RBP5.71□□□□□ -1.5
RPN8YOR261C YOL073CQ08232 322 aa5.71□□□□□ -1.5
RPN8YOR261C TGL5Q12043 749 aa5.71□□□□□ -1.5
RPN8YOR261C ALG7P07286 448 aa5.7□□□□□ -1.5
RPN8YOR261C MET3P08536 511 aa5.7□□□□□ -1.5
RPN8YOR261C CCR4P31384 837 aaKnown RBP5.7□□□□□ -1.5
RPN8YOR261C SFP1P32432 683 aa5.7□□□□□ -1.5
RPN8YOR261C YBR053CP38235 358 aa5.7□□□□□ -1.5
RPN8YOR261C ELO3P40319 345 aa5.7□□□□□ -1.5
RPN8YOR261C AMA1P50082 593 aa5.7□□□□□ -1.5
RPN8YOR261C DOS2P54858 310 aa5.7□□□□□ -1.5
RPN8YOR261C RNT1Q02555 471 aa5.7□□□□□ -1.5
RPN8YOR261C ADR1P07248 1323 aa5.7□□□□□ -1.5
RPN8YOR261C CAF20P12962 161 aaKnown RBP5.69□□□□□ -1.5
RPN8YOR261C FPR3P38911 411 aaKnown RBP5.69□□□□□ -1.5
RPN8YOR261C ECM1P39715 212 aa5.69□□□□□ -1.5
RPN8YOR261C PRP31P49704 494 aaPredicted RBP5.69□□□□□ -1.5
RPN8YOR261C ORC4P54791 529 aa5.69□□□□□ -1.5
RPN8YOR261C CTF4Q01454 927 aa5.69□□□□□ -1.5
RPN8YOR261C FRE5Q08908 694 aa5.69□□□□□ -1.5
RPN8YOR261C PPR1P07272 904 aaPredicted RBP5.68□□□□□ -1.5
RPN8YOR261C YIR042CP40586 236 aa5.68□□□□□ -1.5
RPN8YOR261C YJR142WP47173 342 aa5.68□□□□□ -1.5
RPN8YOR261C YBP2P53169 641 aa5.68□□□□□ -1.5
RPN8YOR261C TEX1P53851 422 aaKnown RBP5.68□□□□□ -1.5
RPN8YOR261C ARP4P80428 489 aa5.68□□□□□ -1.5
RPN8YOR261C ARG5,6Q01217 863 aa5.68□□□□□ -1.5
RPN8YOR261C LAT1P12695 482 aaKnown RBP5.67□□□□□ -1.5
RPN8YOR261C ADE2P21264 571 aaKnown RBP5.67□□□□□ -1.5
RPN8YOR261C MNN4P36044 1178 aa5.67□□□□□ -1.5
RPN8YOR261C SPC42P36094 363 aa5.67□□□□□ -1.5
RPN8YOR261C DOT6P40059 670 aaKnown RBP5.67□□□□□ -1.5
RPN8YOR261C PCL10P53124 433 aa5.67□□□□□ -1.5
RPN8YOR261C YML122CQ03207 126 aa5.67□□□□□ -1.5
RPN8YOR261C ADY4Q05955 493 aa5.67□□□□□ -1.5
RPN8YOR261C ATG11Q12527 1178 aa5.67□□□□□ -1.5
RPN8YOR261C APL2P36000 726 aaPredicted RBP5.66□□□□□ -1.5
RPN8YOR261C YHR112CP38716 378 aa5.66□□□□□ -1.5
RPN8YOR261C HOS4P40480 1083 aa5.66□□□□□ -1.5
RPN8YOR261C BAP3P41815 604 aa5.66□□□□□ -1.5
RPN8YOR261C SDA1P53313 767 aaKnown RBP5.66□□□□□ -1.5
RPN8YOR261C LEE1Q02799 301 aaKnown RBP5.66□□□□□ -1.5
RPN8YOR261C GUD1Q07729 489 aa5.66□□□□□ -1.5
RPN8YOR261C BRN1P38170 754 aa5.65□□□□□ -1.5
RPN8YOR261C GID8P40208 455 aa5.65□□□□□ -1.5
RPN8YOR261C YNR029CP53729 429 aaKnown RBP5.65□□□□□ -1.5
RPN8YOR261C AIM44Q99299 758 aa5.65□□□□□ -1.5
RPN8YOR261C PPS1P38148 807 aa5.64□□□□□ -1.51
RPN8YOR261C HLJ1P48353 224 aa5.64□□□□□ -1.51
RPN8YOR261C BRE5P53741 515 aaKnown RBP5.64□□□□□ -1.51
RPN8YOR261C GAD1Q04792 585 aa5.64□□□□□ -1.51
RPN8YOR261C THI73Q07904 523 aa5.64□□□□□ -1.51
RPN8YOR261C YGR161W-CQ3E744 92 aa5.64□□□□□ -1.51
RPN8YOR261C SSZ1P38788 538 aaKnown RBP5.63□□□□□ -1.51
RPN8YOR261C YJL163CP46996 555 aa5.63□□□□□ -1.51
RPN8YOR261C MCM21Q06675 368 aa5.63□□□□□ -1.51
RPN8YOR261C IRC13Q08630 104 aa5.63□□□□□ -1.51
RPN8YOR261C DCS2Q12123 353 aa5.63□□□□□ -1.51
RPN8YOR261C ERG6P25087 383 aaKnown RBP5.62□□□□□ -1.51
RPN8YOR261C TRZ1P36159 838 aaPredicted RBP5.62□□□□□ -1.51
RPN8YOR261C YJR039WP47107 1121 aa5.62□□□□□ -1.51
RPN8YOR261C HMO1Q03973 246 aaKnown RBP5.62□□□□□ -1.51
RPN8YOR261C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
RPN8YOR261C TYS1P36421 394 aaKnown RBP5.61□□□□□ -1.51
RPN8YOR261C AKL1P38080 1108 aaKnown RBP5.61□□□□□ -1.51
RPN8YOR261C CKB2P38930 258 aa5.61□□□□□ -1.51
RPN8YOR261C LYS9P38999 446 aa5.61□□□□□ -1.51
RPN8YOR261C SET2P46995 733 aaKnown RBP5.61□□□□□ -1.51
RPN8YOR261C YJR096WP47137 282 aa5.61□□□□□ -1.51
RPN8YOR261C UBC11P52492 156 aa5.61□□□□□ -1.51
RPN8YOR261C MTL1P53214 551 aa5.61□□□□□ -1.51
RPN8YOR261C REC102Q02721 264 aa5.61□□□□□ -1.51
RPN8YOR261C HRP1Q99383 534 aaKnown RBP5.61□□□□□ -1.51
RPN8YOR261C OAR1P35731 278 aa5.6□□□□□ -1.51
RPN8YOR261C MOH1P38191 138 aa5.6□□□□□ -1.51
RPN8YOR261C BCD1P38772 366 aa5.6□□□□□ -1.51
RPN8YOR261C CRP1P38845 465 aaKnown RBP5.6□□□□□ -1.51
RPN8YOR261C STB4P50104 949 aa5.6□□□□□ -1.51
RPN8YOR261C MUK1Q02866 612 aa5.6□□□□□ -1.51
RPN8YOR261C YMR206WQ03695 313 aa5.6□□□□□ -1.51
RPN8YOR261C CTK1Q03957 528 aaKnown RBP5.6□□□□□ -1.51
RPN8YOR261C ACF2Q12168 779 aa5.6□□□□□ -1.51
RPN8YOR261C APN2P38207 520 aa5.59□□□□□ -1.51
RPN8YOR261C PMT3P47190 753 aa5.59□□□□□ -1.51
RPN8YOR261C MTQ2Q03920 221 aaPredicted RBP5.59□□□□□ -1.51
RPN8YOR261C OMS1Q06668 471 aa5.59□□□□□ -1.51
RPN8YOR261C RNR1P21524 888 aaKnown RBP5.58□□□□□ -1.52
RPN8YOR261C HIR1P32479 840 aa5.58□□□□□ -1.52
RPN8YOR261C APT2P36973 181 aa5.58□□□□□ -1.52
RPN8YOR261C YHR202WP38887 602 aa5.58□□□□□ -1.52
RPN8YOR261C BEM4P39011 633 aa5.58□□□□□ -1.52
RPN8YOR261C NUG1P40010 520 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms