RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C PZF1P39933 429 aa6.35□□□□□ -1.39
CTF18YMR078C GPP2P40106 250 aaKnown RBP6.35□□□□□ -1.39
CTF18YMR078C NIT1P40447 199 aa6.35□□□□□ -1.39
CTF18YMR078C YJR039WP47107 1121 aa6.35□□□□□ -1.39
CTF18YMR078C RIM8P53179 542 aa6.35□□□□□ -1.39
CTF18YMR078C MRPS35P53292 345 aa6.35□□□□□ -1.39
CTF18YMR078C LAS17Q12446 633 aa6.35□□□□□ -1.39
CTF18YMR078C RNQ1P25367 405 aa6.34□□□□□ -1.39
CTF18YMR078C DUG1P43616 481 aaKnown RBP6.34□□□□□ -1.39
CTF18YMR078C NIT2P47016 307 aa6.34□□□□□ -1.39
CTF18YMR078C MTR3P48240 250 aaPredicted RBP6.34□□□□□ -1.39
CTF18YMR078C TRE2Q08693 809 aa6.34□□□□□ -1.39
CTF18YMR078C KAR4P25583 335 aa6.34□□□□□ -1.39
CTF18YMR078C PLC1P32383 869 aa6.33□□□□□ -1.4
CTF18YMR078C TOD6P34219 525 aa6.33□□□□□ -1.4
CTF18YMR078C NUG1P40010 520 aaKnown RBP6.33□□□□□ -1.4
CTF18YMR078C EXG2P52911 562 aa6.33□□□□□ -1.4
CTF18YMR078C TGL2P54857 326 aa6.33□□□□□ -1.4
CTF18YMR078C RGA2Q06407 1009 aa6.33□□□□□ -1.4
CTF18YMR078C SWM1Q12379 170 aa6.33□□□□□ -1.4
CTF18YMR078C PRE10P21242 288 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
CTF18YMR078C PEX19Q07418 342 aa6.33□□□□□ -1.4
CTF18YMR078C PRP43P53131 767 aaKnown RBP6.32□□□□□ -1.4
CTF18YMR078C ERG5P54781 538 aa6.32□□□□□ -1.4
CTF18YMR078C HFI1Q12060 488 aa6.32□□□□□ -1.4
CTF18YMR078C SER1P33330 395 aaKnown RBP6.31□□□□□ -1.4
CTF18YMR078C TFC4P33339 1025 aa6.31□□□□□ -1.4
CTF18YMR078C OAF3P36023 863 aa6.31□□□□□ -1.4
CTF18YMR078C DID4P36108 232 aa6.31□□□□□ -1.4
CTF18YMR078C FAT1P38225 669 aa6.31□□□□□ -1.4
CTF18YMR078C BEM4P39011 633 aa6.31□□□□□ -1.4
CTF18YMR078C PEX14P53112 341 aa6.31□□□□□ -1.4
CTF18YMR078C YOL057WQ08225 711 aa6.31□□□□□ -1.4
CTF18YMR078C YLR415CO13578 112 aa6.31□□□□□ -1.4
CTF18YMR078C AKL1P38080 1108 aaKnown RBP6.31□□□□□ -1.4
CTF18YMR078C SIC1P38634 284 aa6.31□□□□□ -1.4
CTF18YMR078C PKH1Q03407 766 aa6.31□□□□□ -1.4
CTF18YMR078C TMA10Q06177 86 aa6.31□□□□□ -1.4
CTF18YMR078C APM4Q99186 491 aa6.31□□□□□ -1.4
CTF18YMR078C CTF13P35203 478 aa6.3□□□□□ -1.4
CTF18YMR078C GID8P40208 455 aa6.3□□□□□ -1.4
CTF18YMR078C ADE2P21264 571 aaKnown RBP6.3□□□□□ -1.4
CTF18YMR078C GRX7P38068 203 aa6.3□□□□□ -1.4
CTF18YMR078C MAL31P38156 614 aa6.3□□□□□ -1.4
CTF18YMR078C RPP1P38786 293 aa6.3□□□□□ -1.4
CTF18YMR078C SWI6P09959 803 aa6.29□□□□□ -1.4
CTF18YMR078C AEP2P22136 580 aa6.29□□□□□ -1.4
CTF18YMR078C ELM1P32801 640 aa6.29□□□□□ -1.4
CTF18YMR078C AVT1P47082 602 aa6.29□□□□□ -1.4
CTF18YMR078C YNL034WP53963 612 aa6.29□□□□□ -1.4
CTF18YMR078C YNL018CP53976 612 aa6.29□□□□□ -1.4
CTF18YMR078C ORC4P54791 529 aa6.29□□□□□ -1.4
CTF18YMR078C SND1Q04007 877 aa6.29□□□□□ -1.4
CTF18YMR078C YHM2Q04013 314 aa6.29□□□□□ -1.4
CTF18YMR078C TRM11Q12463 433 aa6.29□□□□□ -1.4
CTF18YMR078C YHR202WP38887 602 aa6.28□□□□□ -1.4
CTF18YMR078C ARG5,6Q01217 863 aa6.28□□□□□ -1.4
CTF18YMR078C RMP1Q12530 201 aa6.28□□□□□ -1.4
CTF18YMR078C SEC65P29478 273 aa6.27□□□□□ -1.4
CTF18YMR078C SET2P46995 733 aaKnown RBP6.27□□□□□ -1.4
CTF18YMR078C PRP31P49704 494 aaPredicted RBP6.27□□□□□ -1.4
CTF18YMR078C YLR407WQ06070 228 aa6.27□□□□□ -1.4
CTF18YMR078C YHR112CP38716 378 aa6.26□□□□□ -1.41
CTF18YMR078C BUL1P48524 976 aa6.26□□□□□ -1.41
CTF18YMR078C TGL5Q12043 749 aa6.26□□□□□ -1.41
CTF18YMR078C CAD1P24813 409 aaKnown RBP6.26□□□□□ -1.41
CTF18YMR078C HEM12P32347 362 aaPredicted RBP6.26□□□□□ -1.41
CTF18YMR078C BIT2P38346 545 aa6.26□□□□□ -1.41
CTF18YMR078C HMO1Q03973 246 aaKnown RBP6.26□□□□□ -1.41
CTF18YMR078C ATP12P22135 325 aa6.25□□□□□ -1.41
CTF18YMR078C STE11P23561 717 aa6.25□□□□□ -1.41
CTF18YMR078C IMG2P25642 146 aaPredicted RBP6.25□□□□□ -1.41
CTF18YMR078C YBR259WP38338 688 aa6.25□□□□□ -1.41
CTF18YMR078C PTA1Q01329 785 aaPredicted RBP6.25□□□□□ -1.41
CTF18YMR078C ENB1Q08299 606 aa6.25□□□□□ -1.41
CTF18YMR078C GLN4P13188 809 aaKnown RBP6.25□□□□□ -1.41
CTF18YMR078C CDC26P14724 124 aa6.25□□□□□ -1.41
CTF18YMR078C YKU70P32807 602 aa6.25□□□□□ -1.41
CTF18YMR078C NOP15P53927 220 aaPredicted RBP6.25□□□□□ -1.41
CTF18YMR078C GPD1Q00055 391 aaKnown RBP6.25□□□□□ -1.41
CTF18YMR078C YPS7Q06325 596 aa6.25□□□□□ -1.41
CTF18YMR078C YLR358CO13565 187 aa6.24□□□□□ -1.41
CTF18YMR078C ERG6P25087 383 aaKnown RBP6.24□□□□□ -1.41
CTF18YMR078C DCG1P32460 244 aa6.24□□□□□ -1.41
CTF18YMR078C APL2P36000 726 aaPredicted RBP6.24□□□□□ -1.41
CTF18YMR078C APN2P38207 520 aa6.24□□□□□ -1.41
CTF18YMR078C MCM6P53091 1017 aaKnown RBP6.24□□□□□ -1.41
CTF18YMR078C YBP2P53169 641 aa6.24□□□□□ -1.41
CTF18YMR078C TEX1P53851 422 aaKnown RBP6.24□□□□□ -1.41
CTF18YMR078C RCR2Q03446 210 aaKnown RBP6.24□□□□□ -1.41
CTF18YMR078C SKY1Q03656 742 aa6.24□□□□□ -1.41
CTF18YMR078C YPR027CQ12079 277 aa6.24□□□□□ -1.41
CTF18YMR078C TMA7Q3E764 64 aaKnown RBP6.24□□□□□ -1.41
CTF18YMR078C MPD2Q99316 277 aa6.24□□□□□ -1.41
CTF18YMR078C NGG1P32494 702 aa6.23□□□□□ -1.41
CTF18YMR078C ECM1P39715 212 aa6.23□□□□□ -1.41
CTF18YMR078C YNL195CP40168 261 aa6.23□□□□□ -1.41
CTF18YMR078C NRG1Q03125 231 aa6.23□□□□□ -1.41
CTF18YMR078C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
CTF18YMR078C ECM38Q05902 660 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms