RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C SIC1P38634 284 aa6.69□□□□□ -1.34
PEX12YMR026C MIP6P38760 659 aaKnown RBP6.69□□□□□ -1.34
PEX12YMR026C HLJ1P48353 224 aa6.69□□□□□ -1.34
PEX12YMR026C SUN4P53616 420 aa6.69□□□□□ -1.34
PEX12YMR026C GSF2Q04697 403 aaKnown RBP6.69□□□□□ -1.34
PEX12YMR026C PUS9Q12069 462 aa6.69□□□□□ -1.34
PEX12YMR026C CCR4P31384 837 aaKnown RBP6.68□□□□□ -1.34
PEX12YMR026C YBR259WP38338 688 aa6.68□□□□□ -1.34
PEX12YMR026C AIM21P40563 679 aa6.68□□□□□ -1.34
PEX12YMR026C MSE1P48525 536 aa6.68□□□□□ -1.34
PEX12YMR026C YBP2P53169 641 aa6.68□□□□□ -1.34
PEX12YMR026C ORC4P54791 529 aa6.68□□□□□ -1.34
PEX12YMR026C KIN4Q01919 800 aa6.68□□□□□ -1.34
PEX12YMR026C DLT1Q04216 342 aa6.68□□□□□ -1.34
PEX12YMR026C GUD1Q07729 489 aa6.68□□□□□ -1.34
PEX12YMR026C TRM13Q12383 476 aa6.68□□□□□ -1.34
PEX12YMR026C MET3P08536 511 aa6.67□□□□□ -1.34
PEX12YMR026C YNR029CP53729 429 aaKnown RBP6.67□□□□□ -1.34
PEX12YMR026C YLR040CQ07988 224 aa6.67□□□□□ -1.34
PEX12YMR026C TGL5Q12043 749 aa6.67□□□□□ -1.34
PEX12YMR026C ELO3P40319 345 aa6.66□□□□□ -1.34
PEX12YMR026C PRP31P49704 494 aaPredicted RBP6.66□□□□□ -1.34
PEX12YMR026C MUP1P50276 574 aa6.66□□□□□ -1.34
PEX12YMR026C PCL10P53124 433 aa6.66□□□□□ -1.34
PEX12YMR026C THI73Q07904 523 aa6.66□□□□□ -1.34
PEX12YMR026C CAF20P12962 161 aaKnown RBP6.65□□□□□ -1.34
PEX12YMR026C SUL1P38359 859 aa6.65□□□□□ -1.34
PEX12YMR026C CRP1P38845 465 aaKnown RBP6.65□□□□□ -1.34
PEX12YMR026C ECM1P39715 212 aa6.65□□□□□ -1.34
PEX12YMR026C AMA1P50082 593 aa6.65□□□□□ -1.34
PEX12YMR026C ADE2P21264 571 aaKnown RBP6.64□□□□□ -1.35
PEX12YMR026C MNN4P36044 1178 aa6.64□□□□□ -1.35
PEX12YMR026C ARP4P80428 489 aa6.64□□□□□ -1.35
PEX12YMR026C RNT1Q02555 471 aa6.64□□□□□ -1.35
PEX12YMR026C ALG7P07286 448 aa6.63□□□□□ -1.35
PEX12YMR026C YIR042CP40586 236 aa6.63□□□□□ -1.35
PEX12YMR026C TEX1P53851 422 aaKnown RBP6.63□□□□□ -1.35
PEX12YMR026C ARG5,6Q01217 863 aa6.63□□□□□ -1.35
PEX12YMR026C YOL073CQ08232 322 aa6.63□□□□□ -1.35
PEX12YMR026C FRE5Q08908 694 aa6.63□□□□□ -1.35
PEX12YMR026C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
PEX12YMR026C YBR053CP38235 358 aa6.62□□□□□ -1.35
PEX12YMR026C PMT3P47190 753 aa6.62□□□□□ -1.35
PEX12YMR026C ATG11Q12527 1178 aa6.62□□□□□ -1.35
PEX12YMR026C LAT1P12695 482 aaKnown RBP6.61□□□□□ -1.35
PEX12YMR026C APL2P36000 726 aaPredicted RBP6.61□□□□□ -1.35
PEX12YMR026C TYS1P36421 394 aaKnown RBP6.61□□□□□ -1.35
PEX12YMR026C YHR112CP38716 378 aa6.61□□□□□ -1.35
PEX12YMR026C CHS7P38843 316 aa6.61□□□□□ -1.35
PEX12YMR026C CKB2P38930 258 aa6.61□□□□□ -1.35
PEX12YMR026C YJR096WP47137 282 aa6.61□□□□□ -1.35
PEX12YMR026C LEE1Q02799 301 aaKnown RBP6.61□□□□□ -1.35
PEX12YMR026C GAD1Q04792 585 aa6.61□□□□□ -1.35
PEX12YMR026C PPR1P07272 904 aaPredicted RBP6.6□□□□□ -1.35
PEX12YMR026C BRE5P53741 515 aaKnown RBP6.6□□□□□ -1.35
PEX12YMR026C UME1Q03010 460 aa6.6□□□□□ -1.35
PEX12YMR026C ADY4Q05955 493 aa6.6□□□□□ -1.35
PEX12YMR026C MCM21Q06675 368 aa6.6□□□□□ -1.35
PEX12YMR026C DCS2Q12123 353 aa6.6□□□□□ -1.35
PEX12YMR026C PNS1Q12412 539 aa6.6□□□□□ -1.35
PEX12YMR026C SSZ1P38788 538 aaKnown RBP6.59□□□□□ -1.35
PEX12YMR026C GID8P40208 455 aa6.59□□□□□ -1.35
PEX12YMR026C YGL081WP53156 320 aa6.59□□□□□ -1.35
PEX12YMR026C MTQ2Q03920 221 aaPredicted RBP6.59□□□□□ -1.35
PEX12YMR026C PRP19P32523 503 aaKnown RBP6.58□□□□□ -1.36
PEX12YMR026C TRZ1P36159 838 aaPredicted RBP6.58□□□□□ -1.36
PEX12YMR026C APT2P36973 181 aa6.58□□□□□ -1.36
PEX12YMR026C BAP3P41815 604 aa6.58□□□□□ -1.36
PEX12YMR026C YJR039WP47107 1121 aa6.58□□□□□ -1.36
PEX12YMR026C SLI1P53304 468 aa6.58□□□□□ -1.36
PEX12YMR026C CTF4Q01454 927 aa6.58□□□□□ -1.36
PEX12YMR026C NUP145P49687 1317 aa6.57□□□□□ -1.36
PEX12YMR026C HOS4P40480 1083 aa6.57□□□□□ -1.36
PEX12YMR026C RET2P43621 546 aa6.57□□□□□ -1.36
PEX12YMR026C SET2P46995 733 aaKnown RBP6.57□□□□□ -1.36
PEX12YMR026C YJL163CP46996 555 aa6.57□□□□□ -1.36
PEX12YMR026C REC102Q02721 264 aa6.57□□□□□ -1.36
PEX12YMR026C IRC13Q08630 104 aa6.57□□□□□ -1.36
PEX12YMR026C AKL1P38080 1108 aaKnown RBP6.56□□□□□ -1.36
PEX12YMR026C MAL31P38156 614 aa6.56□□□□□ -1.36
PEX12YMR026C APN2P38207 520 aa6.56□□□□□ -1.36
PEX12YMR026C UBP12P39538 1254 aa6.56□□□□□ -1.36
PEX12YMR026C YGR237CP50089 785 aa6.56□□□□□ -1.36
PEX12YMR026C GPG1P53130 126 aa6.56□□□□□ -1.36
PEX12YMR026C GPD1Q00055 391 aaKnown RBP6.56□□□□□ -1.36
PEX12YMR026C CTK1Q03957 528 aaKnown RBP6.56□□□□□ -1.36
PEX12YMR026C ERG6P25087 383 aaKnown RBP6.55□□□□□ -1.36
PEX12YMR026C PPS1P38148 807 aa6.55□□□□□ -1.36
PEX12YMR026C TDA3P38758 523 aa6.55□□□□□ -1.36
PEX12YMR026C MTL1P53214 551 aa6.55□□□□□ -1.36
PEX12YMR026C HMO1Q03973 246 aaKnown RBP6.55□□□□□ -1.36
PEX12YMR026C BCD1P38772 366 aa6.54□□□□□ -1.36
PEX12YMR026C LYS9P38999 446 aa6.54□□□□□ -1.36
PEX12YMR026C HRP1Q99383 534 aaKnown RBP6.54□□□□□ -1.36
PEX12YMR026C PYC1P11154 1178 aaKnown RBP6.53□□□□□ -1.36
PEX12YMR026C RNR1P21524 888 aaKnown RBP6.53□□□□□ -1.36
PEX12YMR026C HIS7P33734 552 aaKnown RBP6.53□□□□□ -1.36
PEX12YMR026C YHR202WP38887 602 aa6.53□□□□□ -1.36
PEX12YMR026C BEM4P39011 633 aa6.53□□□□□ -1.36
PEX12YMR026C NUG1P40010 520 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms