RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	CDC11	P32458	415 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	MRPL7	P36519	292 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	MSC7	P38694	644 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	SAH1	P39954	449 aa	Known RBP	13.58	□□□□□ -0.24
LSM3	YLR438C-A	STB4	P50104	949 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	NOP13	P53883	403 aa	Known RBP RIP-Chip data	13.58	□□□□□ -0.24	not detected
LSM3	YLR438C-A	CDD1	Q06549	142 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	REC8	Q12188	680 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	AI5_BETA	Q9ZZX0	354 aa		13.58	□□□□□ -0.24
LSM3	YLR438C-A	MSD1	P15179	658 aa	Known RBP	13.57	□□□□□ -0.24
LSM3	YLR438C-A	SLX1	P38324	304 aa		13.57	□□□□□ -0.24
LSM3	YLR438C-A	YMR124W	P39523	943 aa	Known RBP	13.57	□□□□□ -0.24
LSM3	YLR438C-A	BUD16	P39988	312 aa		13.57	□□□□□ -0.24
LSM3	YLR438C-A	JHD1	P40034	492 aa		13.57	□□□□□ -0.24
LSM3	YLR438C-A	TIF35	Q04067	274 aa	Known RBP	13.57	□□□□□ -0.24
LSM3	YLR438C-A	ECM3	Q99252	613 aa		13.57	□□□□□ -0.24
LSM3	YLR438C-A	RIF1	P29539	1916 aa		13.56	□□□□□ -0.24
LSM3	YLR438C-A	TRP2	P00899	507 aa	Known RBP	13.56	□□□□□ -0.24
LSM3	YLR438C-A	SEC21	P32074	935 aa	Known RBP	13.56	□□□□□ -0.24
LSM3	YLR438C-A	TRZ1	P36159	838 aa	Predicted RBP	13.56	□□□□□ -0.24
LSM3	YLR438C-A	EXO5	P38289	585 aa		13.56	□□□□□ -0.24
LSM3	YLR438C-A	DYS1	P38791	387 aa		13.56	□□□□□ -0.24
LSM3	YLR438C-A	GEM1	P39722	662 aa		13.56	□□□□□ -0.24
LSM3	YLR438C-A	VPS70	P47161	811 aa		13.56	□□□□□ -0.24
LSM3	YLR438C-A	EEB1	Q02891	456 aa		13.56	□□□□□ -0.24
LSM3	YLR438C-A	RCR2	Q03446	210 aa	Known RBP	13.56	□□□□□ -0.24
LSM3	YLR438C-A	SNU56	Q03782	492 aa	Known RBP	13.56	□□□□□ -0.24
LSM3	YLR438C-A	PKH2	Q12236	1081 aa	Known RBP	13.56	□□□□□ -0.24
LSM3	YLR438C-A	SEC23	P15303	768 aa	Known RBP	13.55	□□□□□ -0.24
LSM3	YLR438C-A	RNR1	P21524	888 aa	Known RBP	13.55	□□□□□ -0.24
LSM3	YLR438C-A	VMA4	P22203	233 aa	Known RBP	13.55	□□□□□ -0.24
LSM3	YLR438C-A	CYS3	P31373	394 aa	Known RBP	13.55	□□□□□ -0.24
LSM3	YLR438C-A	APN2	P38207	520 aa		13.55	□□□□□ -0.24
LSM3	YLR438C-A	XDJ1	P39102	459 aa		13.55	□□□□□ -0.24
LSM3	YLR438C-A	RSC8	P43609	557 aa	Known RBP	13.55	□□□□□ -0.24
LSM3	YLR438C-A	STU2	P46675	888 aa		13.55	□□□□□ -0.24
LSM3	YLR438C-A	APT1	P49435	187 aa	Known RBP	13.55	□□□□□ -0.24
LSM3	YLR438C-A	YPR027C	Q12079	277 aa		13.55	□□□□□ -0.24
LSM3	YLR438C-A	YER152C	P10356	443 aa		13.54	□□□□□ -0.24
LSM3	YLR438C-A	STO1	P34160	861 aa	Known RBP	13.54	□□□□□ -0.24
LSM3	YLR438C-A	YKL050C	P35736	922 aa		13.54	□□□□□ -0.24
LSM3	YLR438C-A	MCM6	P53091	1017 aa	Known RBP	13.54	□□□□□ -0.24
LSM3	YLR438C-A	DAS2	Q12084	232 aa		13.54	□□□□□ -0.24
LSM3	YLR438C-A	HIP1	P06775	603 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	CIT2	P08679	460 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	SRB4	P32569	687 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	CCL1	P37366	393 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	NOP4	P37838	685 aa	Known RBP	13.53	□□□□□ -0.24
LSM3	YLR438C-A	MCX1	P38323	520 aa	Predicted RBP	13.53	□□□□□ -0.24
LSM3	YLR438C-A	YHR202W	P38887	602 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	PSY2	P40164	858 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	YTA12	P40341	825 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	OPT1	P40897	799 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	YJR054W	P47114	497 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	JJJ1	P53863	590 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	STP1	Q00947	519 aa		13.53	□□□□□ -0.24
LSM3	YLR438C-A	CHS1	P08004	1131 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	PET123	P17558	318 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	ADK2	P26364	225 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	BIO2	P32451	375 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	KDX1	P36005	433 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	SHE3	P38272	425 aa	Known RBP	13.52	□□□□□ -0.25
LSM3	YLR438C-A	SIP5	P40210	489 aa	Known RBP	13.52	□□□□□ -0.25
LSM3	YLR438C-A	SEC9	P40357	651 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	YGR021W	P53212	290 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	MZM1	Q03429	123 aa	Predicted RBP	13.52	□□□□□ -0.25
LSM3	YLR438C-A	SOV1	Q04748	898 aa		13.52	□□□□□ -0.25
LSM3	YLR438C-A	RPS3	P05750	240 aa	Known RBP	13.51	□□□□□ -0.25
LSM3	YLR438C-A	HAP2	P06774	265 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	RAD57	P25301	460 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	SCJ1	P25303	377 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	RRN6	P32786	894 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	AGP2	P38090	596 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	POL31	P46957	487 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	HOP2	P53187	214 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	GPD1	Q00055	391 aa	Known RBP	13.51	□□□□□ -0.25
LSM3	YLR438C-A	EAR1	Q03212	550 aa		13.51	□□□□□ -0.25
LSM3	YLR438C-A	TAO3	P40468	2376 aa		13.5	□□□□□ -0.25
LSM3	YLR438C-A	KGD2	P19262	463 aa	Predicted RBP	13.5	□□□□□ -0.25
LSM3	YLR438C-A	GYP6	P32806	458 aa		13.5	□□□□□ -0.25
LSM3	YLR438C-A	PHO86	P46956	311 aa		13.5	□□□□□ -0.25
LSM3	YLR438C-A	YGL036W	P53185	909 aa	Predicted RBP	13.5	□□□□□ -0.25
LSM3	YLR438C-A	SPC98	P53540	846 aa		13.5	□□□□□ -0.25
LSM3	YLR438C-A	SYH1	Q02875	849 aa	Known RBP	13.5	□□□□□ -0.25
LSM3	YLR438C-A	YMR018W	Q04364	514 aa		13.5	□□□□□ -0.25
LSM3	YLR438C-A	JIP3	O13555	125 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	GAL80	P04387	435 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	FRE1	P32791	686 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	BLI1	P35727	113 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	SET5	P38890	526 aa	Known RBP	13.49	□□□□□ -0.25
LSM3	YLR438C-A	EFM4	P40516	257 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	MND1	P53102	219 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	MUB1	Q03162	620 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	YLR001C	Q07895	862 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	TAF10	Q12030	206 aa		13.49	□□□□□ -0.25
LSM3	YLR438C-A	VBA3	P25594	458 aa		13.48	□□□□□ -0.25
LSM3	YLR438C-A	GAC1	P28006	793 aa		13.48	□□□□□ -0.25
LSM3	YLR438C-A	VBA5	P36172	582 aa		13.48	□□□□□ -0.25
LSM3	YLR438C-A	YMC2	P38087	329 aa		13.48	□□□□□ -0.25
LSM3	YLR438C-A	CBR1	P38626	284 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms