RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W GAL11P19659 1081 aa2.5□□□□□ -2.01
CFT2YLR115W PER1P25625 357 aa2.5□□□□□ -2.01
CFT2YLR115W MTC2P34246 357 aa2.5□□□□□ -2.01
CFT2YLR115W MTH1P35198 433 aa2.5□□□□□ -2.01
CFT2YLR115W SDS3P40505 327 aa2.5□□□□□ -2.01
CFT2YLR115W AMA1P50082 593 aa2.5□□□□□ -2.01
CFT2YLR115W TGL5Q12043 749 aa2.5□□□□□ -2.01
CFT2YLR115W MCD4P36051 919 aa2.5□□□□□ -2.01
CFT2YLR115W CHZ1P40019 153 aaPredicted RBP2.5□□□□□ -2.01
CFT2YLR115W UBA2P52488 636 aa2.5□□□□□ -2.01
CFT2YLR115W GND2P53319 492 aa2.5□□□□□ -2.01
CFT2YLR115W LAT1P12695 482 aaKnown RBP2.49□□□□□ -2.01
CFT2YLR115W YPT53P36019 220 aa2.49□□□□□ -2.01
CFT2YLR115W SAP190P36123 1033 aa2.49□□□□□ -2.01
CFT2YLR115W YHL017WP38745 532 aa2.49□□□□□ -2.01
CFT2YLR115W YJR008WP47085 338 aa2.49□□□□□ -2.01
CFT2YLR115W IRC10Q08118 586 aa2.49□□□□□ -2.01
CFT2YLR115W IRC13Q08630 104 aa2.49□□□□□ -2.01
CFT2YLR115W MIH1P23748 554 aa2.49□□□□□ -2.01
CFT2YLR115W TIM23P32897 222 aa2.49□□□□□ -2.01
CFT2YLR115W BAP3P41815 604 aa2.49□□□□□ -2.01
CFT2YLR115W HSV2P50079 448 aaPredicted RBP2.49□□□□□ -2.01
CFT2YLR115W NRG1Q03125 231 aa2.49□□□□□ -2.01
CFT2YLR115W MDM12Q92328 271 aa2.49□□□□□ -2.01
CFT2YLR115W DRS2P39524 1355 aa2.48□□□□□ -2.01
CFT2YLR115W DIF1O13577 133 aa2.48□□□□□ -2.01
CFT2YLR115W PBP2P38151 413 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CFT2YLR115W BCD1P38772 366 aa2.48□□□□□ -2.01
CFT2YLR115W YIR042CP40586 236 aa2.48□□□□□ -2.01
CFT2YLR115W ZDS1P50111 915 aaKnown RBP2.48□□□□□ -2.01
CFT2YLR115W TEX1P53851 422 aaKnown RBP2.48□□□□□ -2.01
CFT2YLR115W FPR4Q06205 392 aaPredicted RBP2.48□□□□□ -2.01
CFT2YLR115W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CFT2YLR115W SUT2Q12286 268 aa2.48□□□□□ -2.01
CFT2YLR115W MEF1P25039 761 aa2.48□□□□□ -2.01
CFT2YLR115W NGG1P32494 702 aa2.48□□□□□ -2.01
CFT2YLR115W NAB3P38996 802 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CFT2YLR115W TIM44Q01852 431 aa2.48□□□□□ -2.01
CFT2YLR115W YLR149CQ99296 730 aa2.48□□□□□ -2.01
CFT2YLR115W HIR1P32479 840 aa2.47□□□□□ -2.01
CFT2YLR115W SPC42P36094 363 aa2.47□□□□□ -2.01
CFT2YLR115W UBS1P38290 277 aa2.47□□□□□ -2.01
CFT2YLR115W SHR5P41912 237 aa2.47□□□□□ -2.01
CFT2YLR115W UBC11P52492 156 aa2.47□□□□□ -2.01
CFT2YLR115W RGC1Q06108 1083 aaKnown RBP2.47□□□□□ -2.01
CFT2YLR115W MRH1Q12117 320 aaPredicted RBP2.47□□□□□ -2.01
CFT2YLR115W CDC9P04819 755 aa2.47□□□□□ -2.01
CFT2YLR115W ADE2P21264 571 aaKnown RBP2.47□□□□□ -2.01
CFT2YLR115W SRP40P32583 406 aaPredicted RBP2.47□□□□□ -2.01
CFT2YLR115W RRP14P36080 434 aaKnown RBP2.47□□□□□ -2.01
CFT2YLR115W YBR259WP38338 688 aa2.47□□□□□ -2.01
CFT2YLR115W ECM1P39715 212 aa2.47□□□□□ -2.01
CFT2YLR115W CAF16P43569 289 aa2.47□□□□□ -2.01
CFT2YLR115W ALY2P47029 1046 aa2.47□□□□□ -2.01
CFT2YLR115W MTR3P48240 250 aaPredicted RBP2.47□□□□□ -2.01
CFT2YLR115W CRR1Q05790 422 aa2.47□□□□□ -2.01
CFT2YLR115W HBT1Q07653 1046 aaKnown RBP2.47□□□□□ -2.01
CFT2YLR115W YHR112CP38716 378 aa2.46□□□□□ -2.02
CFT2YLR115W FMP52P40008 231 aa2.46□□□□□ -2.02
CFT2YLR115W DAS1P47005 663 aa2.46□□□□□ -2.02
CFT2YLR115W BNA2P47125 453 aa2.46□□□□□ -2.02
CFT2YLR115W ATG11Q12527 1178 aa2.46□□□□□ -2.02
CFT2YLR115W Q0142Q9ZZW4 58 aa2.46□□□□□ -2.02
CFT2YLR115W LYS9P38999 446 aa2.46□□□□□ -2.02
CFT2YLR115W OSW7P43611 510 aa2.46□□□□□ -2.02
CFT2YLR115W DOS2P54858 310 aa2.46□□□□□ -2.02
CFT2YLR115W SGO1Q08490 590 aa2.46□□□□□ -2.02
CFT2YLR115W GIN4Q12263 1142 aa2.46□□□□□ -2.02
CFT2YLR115W YOR131CQ12486 218 aa2.46□□□□□ -2.02
CFT2YLR115W SIR3P06701 978 aa2.45□□□□□ -2.02
CFT2YLR115W YKL091CP33324 310 aaKnown RBP2.45□□□□□ -2.02
CFT2YLR115W MIP6P38760 659 aaKnown RBP2.45□□□□□ -2.02
CFT2YLR115W PCL5P38794 229 aa2.45□□□□□ -2.02
CFT2YLR115W NMD2P38798 1089 aaKnown RBP2.45□□□□□ -2.02
CFT2YLR115W NUP82P40368 713 aa2.45□□□□□ -2.02
CFT2YLR115W MTL1P53214 551 aa2.45□□□□□ -2.02
CFT2YLR115W MDG1P53885 366 aa2.45□□□□□ -2.02
CFT2YLR115W RIA1P53893 1110 aa2.45□□□□□ -2.02
CFT2YLR115W ARG5,6Q01217 863 aa2.45□□□□□ -2.02
CFT2YLR115W HMO1Q03973 246 aaKnown RBP2.45□□□□□ -2.02
CFT2YLR115W ERG6P25087 383 aaKnown RBP2.45□□□□□ -2.02
CFT2YLR115W PPG1P32838 368 aa2.45□□□□□ -2.02
CFT2YLR115W SWE1P32944 819 aa2.45□□□□□ -2.02
CFT2YLR115W PRP31P49704 494 aaPredicted RBP2.45□□□□□ -2.02
CFT2YLR115W TEL2P53038 688 aa2.45□□□□□ -2.02
CFT2YLR115W ARP4P80428 489 aa2.45□□□□□ -2.02
CFT2YLR115W CIT2P08679 460 aa2.44□□□□□ -2.02
CFT2YLR115W SRD1P09007 221 aa2.44□□□□□ -2.02
CFT2YLR115W VBA3P25594 458 aa2.44□□□□□ -2.02
CFT2YLR115W APL2P36000 726 aaPredicted RBP2.44□□□□□ -2.02
CFT2YLR115W YKR051WP36142 418 aa2.44□□□□□ -2.02
CFT2YLR115W FMO1P38866 432 aa2.44□□□□□ -2.02
CFT2YLR115W HRB1P38922 454 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
CFT2YLR115W GID8P40208 455 aa2.44□□□□□ -2.02
CFT2YLR115W SMX3P54999 86 aaPredicted RBP2.44□□□□□ -2.02
CFT2YLR115W SNP1Q00916 300 aaPredicted RBP2.44□□□□□ -2.02
CFT2YLR115W GAD1Q04792 585 aa2.44□□□□□ -2.02
CFT2YLR115W HRP1Q99383 534 aaKnown RBP2.44□□□□□ -2.02
CFT2YLR115W STO1P34160 861 aaKnown RBP2.44□□□□□ -2.02
CFT2YLR115W STU2P46675 888 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms