RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	UBC9	P50623	157 aa	Predicted RBP	5.03	□□□□□ -1.6
RTA1	YGR213C	RPN7	Q06103	429 aa	Known RBP	5.03	□□□□□ -1.6
RTA1	YGR213C	AIM39	Q08223	395 aa		5.03	□□□□□ -1.6
RTA1	YGR213C	TUB2	P02557	457 aa	Known RBP	5.02	□□□□□ -1.61
RTA1	YGR213C	CCR4	P31384	837 aa	Known RBP	5.02	□□□□□ -1.61
RTA1	YGR213C	YKR018C	P36114	725 aa		5.02	□□□□□ -1.61
RTA1	YGR213C	DOT6	P40059	670 aa	Known RBP	5.02	□□□□□ -1.61
RTA1	YGR213C	FKH2	P41813	862 aa		5.02	□□□□□ -1.61
RTA1	YGR213C	SDA1	P53313	767 aa	Known RBP	5.02	□□□□□ -1.61
RTA1	YGR213C	NRG1	Q03125	231 aa		5.02	□□□□□ -1.61
RTA1	YGR213C	ERG4	P25340	473 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	KTR4	P38131	464 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	YBR259W	P38338	688 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	HLJ1	P48353	224 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	PCL10	P53124	433 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	YNR029C	P53729	429 aa	Known RBP	5.01	□□□□□ -1.61
RTA1	YGR213C	KIN4	Q01919	800 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	GSF2	Q04697	403 aa	Known RBP	5.01	□□□□□ -1.61
RTA1	YGR213C	GUD1	Q07729	489 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	PUS9	Q12069	462 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	TRM13	Q12383	476 aa		5.01	□□□□□ -1.61
RTA1	YGR213C	ECM1	P39715	212 aa		5	□□□□□ -1.61
RTA1	YGR213C	AIM21	P40563	679 aa		5	□□□□□ -1.61
RTA1	YGR213C	MSE1	P48525	536 aa		5	□□□□□ -1.61
RTA1	YGR213C	SUN4	P53616	420 aa		5	□□□□□ -1.61
RTA1	YGR213C	ORC4	P54791	529 aa		5	□□□□□ -1.61
RTA1	YGR213C	ARP4	P80428	489 aa		5	□□□□□ -1.61
RTA1	YGR213C	DLT1	Q04216	342 aa		5	□□□□□ -1.61
RTA1	YGR213C	YLR040C	Q07988	224 aa		5	□□□□□ -1.61
RTA1	YGR213C	TGL5	Q12043	749 aa		5	□□□□□ -1.61
RTA1	YGR213C	MET3	P08536	511 aa		4.99	□□□□□ -1.61
RTA1	YGR213C	CRP1	P38845	465 aa	Known RBP	4.99	□□□□□ -1.61
RTA1	YGR213C	ELO3	P40319	345 aa		4.99	□□□□□ -1.61
RTA1	YGR213C	PRP31	P49704	494 aa	Predicted RBP	4.99	□□□□□ -1.61
RTA1	YGR213C	YBP2	P53169	641 aa		4.99	□□□□□ -1.61
RTA1	YGR213C	THI73	Q07904	523 aa		4.99	□□□□□ -1.61
RTA1	YGR213C	CAF20	P12962	161 aa	Known RBP	4.98	□□□□□ -1.61
RTA1	YGR213C	YBR053C	P38235	358 aa		4.98	□□□□□ -1.61
RTA1	YGR213C	PMT3	P47190	753 aa		4.98	□□□□□ -1.61
RTA1	YGR213C	AMA1	P50082	593 aa		4.98	□□□□□ -1.61
RTA1	YGR213C	MUP1	P50276	574 aa		4.98	□□□□□ -1.61
RTA1	YGR213C	ARG5,6	Q01217	863 aa		4.98	□□□□□ -1.61
RTA1	YGR213C	ATG11	Q12527	1178 aa		4.98	□□□□□ -1.61
RTA1	YGR213C	ADE2	P21264	571 aa	Known RBP	4.97	□□□□□ -1.61
RTA1	YGR213C	APL2	P36000	726 aa	Predicted RBP	4.97	□□□□□ -1.61
RTA1	YGR213C	CHS7	P38843	316 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	CKB2	P38930	258 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	GID8	P40208	455 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	YIR042C	P40586	236 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	YJR096W	P47137	282 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	YGL081W	P53156	320 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	CWC22	P53333	577 aa	Known RBP	4.97	□□□□□ -1.61
RTA1	YGR213C	TEX1	P53851	422 aa	Known RBP	4.97	□□□□□ -1.61
RTA1	YGR213C	RNT1	Q02555	471 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	YOL073C	Q08232	322 aa		4.97	□□□□□ -1.61
RTA1	YGR213C	ALG7	P07286	448 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	LAT1	P12695	482 aa	Known RBP	4.96	□□□□□ -1.62
RTA1	YGR213C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RTA1	YGR213C	TYS1	P36421	394 aa	Known RBP	4.96	□□□□□ -1.62
RTA1	YGR213C	SUL1	P38359	859 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	SSZ1	P38788	538 aa	Known RBP	4.96	□□□□□ -1.62
RTA1	YGR213C	YJR039W	P47107	1121 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	BRE5	P53741	515 aa	Known RBP	4.96	□□□□□ -1.62
RTA1	YGR213C	LEE1	Q02799	301 aa	Known RBP	4.96	□□□□□ -1.62
RTA1	YGR213C	UME1	Q03010	460 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	GAD1	Q04792	585 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	FRE5	Q08908	694 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	DCS2	Q12123	353 aa		4.96	□□□□□ -1.62
RTA1	YGR213C	PPR1	P07272	904 aa	Predicted RBP	4.95	□□□□□ -1.62
RTA1	YGR213C	YHR112C	P38716	378 aa		4.95	□□□□□ -1.62
RTA1	YGR213C	HOS4	P40480	1083 aa		4.95	□□□□□ -1.62
RTA1	YGR213C	BAP3	P41815	604 aa		4.95	□□□□□ -1.62
RTA1	YGR213C	GPG1	P53130	126 aa		4.95	□□□□□ -1.62
RTA1	YGR213C	MTQ2	Q03920	221 aa	Predicted RBP	4.95	□□□□□ -1.62
RTA1	YGR213C	ADY4	Q05955	493 aa		4.95	□□□□□ -1.62
RTA1	YGR213C	MCM21	Q06675	368 aa		4.95	□□□□□ -1.62
RTA1	YGR213C	UBP12	P39538	1254 aa		4.94	□□□□□ -1.62
RTA1	YGR213C	SLI1	P53304	468 aa		4.94	□□□□□ -1.62
RTA1	YGR213C	HMO1	Q03973	246 aa	Known RBP	4.94	□□□□□ -1.62
RTA1	YGR213C	RLP24	Q07915	199 aa	Known RBP	4.94	□□□□□ -1.62
RTA1	YGR213C	NUP145	P49687	1317 aa		4.94	□□□□□ -1.62
RTA1	YGR213C	QCR6	P00127	147 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	PRP19	P32523	503 aa	Known RBP	4.93	□□□□□ -1.62
RTA1	YGR213C	TRZ1	P36159	838 aa	Predicted RBP	4.93	□□□□□ -1.62
RTA1	YGR213C	APT2	P36973	181 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	AKL1	P38080	1108 aa	Known RBP	4.93	□□□□□ -1.62
RTA1	YGR213C	RET2	P43621	546 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	SET2	P46995	733 aa	Known RBP	4.93	□□□□□ -1.62
RTA1	YGR213C	YJL163C	P46996	555 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	REC102	Q02721	264 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	PLP2	Q12017	286 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	PNS1	Q12412	539 aa		4.93	□□□□□ -1.62
RTA1	YGR213C	ERG6	P25087	383 aa	Known RBP	4.92	□□□□□ -1.62
RTA1	YGR213C	MAL31	P38156	614 aa		4.92	□□□□□ -1.62
RTA1	YGR213C	BEM4	P39011	633 aa		4.92	□□□□□ -1.62
RTA1	YGR213C	YGR237C	P50089	785 aa		4.92	□□□□□ -1.62
RTA1	YGR213C	CTF4	Q01454	927 aa		4.92	□□□□□ -1.62
RTA1	YGR213C	HRP1	Q99383	534 aa	Known RBP	4.92	□□□□□ -1.62
RTA1	YGR213C	HSP82	P02829	709 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	APN2	P38207	520 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms