RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W MGE1P38523 228 aa1.83□□□□□ -2.12
CFT1YDR301W TVP23P38962 199 aa1.83□□□□□ -2.12
CFT1YDR301W ORC5P50874 479 aa1.83□□□□□ -2.12
CFT1YDR301W OPY2Q06810 360 aa1.83□□□□□ -2.12
CFT1YDR301W YDR524C-BQ3E6R4 66 aa1.83□□□□□ -2.12
CFT1YDR301W CDC37P06101 506 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W HAP2P06774 265 aa1.83□□□□□ -2.12
CFT1YDR301W YPK1P12688 680 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W ISF1P32488 338 aa1.83□□□□□ -2.12
CFT1YDR301W SAP190P36123 1033 aa1.83□□□□□ -2.12
CFT1YDR301W TRZ1P36159 838 aaPredicted RBP1.83□□□□□ -2.12
CFT1YDR301W YHR202WP38887 602 aa1.83□□□□□ -2.12
CFT1YDR301W RAD55P38953 406 aa1.83□□□□□ -2.12
CFT1YDR301W NAB3P38996 802 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CFT1YDR301W DSE1P40077 573 aa1.83□□□□□ -2.12
CFT1YDR301W YTA12P40341 825 aa1.83□□□□□ -2.12
CFT1YDR301W RRD1P40454 393 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W TMA108P40462 946 aa1.83□□□□□ -2.12
CFT1YDR301W SCD6P45978 349 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12 RIP-Chip
CFT1YDR301W FYV8P46949 817 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W CLA4P48562 842 aa1.83□□□□□ -2.12
CFT1YDR301W TOF1P53840 1238 aa1.83□□□□□ -2.12
CFT1YDR301W SUB1P54000 292 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W ADA2Q02336 434 aa1.83□□□□□ -2.12
CFT1YDR301W MUK1Q02866 612 aa1.83□□□□□ -2.12
CFT1YDR301W EEB1Q02891 456 aa1.83□□□□□ -2.12
CFT1YDR301W AIM32Q04689 311 aa1.83□□□□□ -2.12
CFT1YDR301W YLH47Q06493 454 aa1.83□□□□□ -2.12
CFT1YDR301W YOL075CQ08234 1294 aa1.83□□□□□ -2.12
CFT1YDR301W RPP2BP02400 110 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W ATP1P07251 545 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W SWI6P09959 803 aa1.83□□□□□ -2.12
CFT1YDR301W MSD1P15179 658 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W RNR1P21524 888 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W MCM2P29469 868 aa1.83□□□□□ -2.12
CFT1YDR301W RIM4P38741 713 aa1.83□□□□□ -2.12
CFT1YDR301W TCD1P38756 429 aa1.83□□□□□ -2.12
CFT1YDR301W SMC2P38989 1170 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W MMF1P40185 145 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W SHQ1P40486 507 aaPredicted RBP1.83□□□□□ -2.12
CFT1YDR301W OPT1P40897 799 aa1.83□□□□□ -2.12
CFT1YDR301W LSB6P42951 607 aa1.83□□□□□ -2.12
CFT1YDR301W RSC8P43609 557 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W BOP3P53958 396 aa1.83□□□□□ -2.12
CFT1YDR301W UTP5Q04177 643 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W YLR455WQ06188 304 aa1.83□□□□□ -2.12
CFT1YDR301W IWR1Q07532 353 aaPredicted RBP1.83□□□□□ -2.12
CFT1YDR301W PUF3Q07807 879 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CFT1YDR301W PSR2Q07949 397 aa1.83□□□□□ -2.12
CFT1YDR301W DNL4Q08387 944 aaPredicted RBP1.83□□□□□ -2.12
CFT1YDR301W RAD59Q12223 238 aa1.83□□□□□ -2.12
CFT1YDR301W YOR131CQ12486 218 aa1.83□□□□□ -2.12
CFT1YDR301W ECM3Q99252 613 aa1.83□□□□□ -2.12
CFT1YDR301W RPS9AO13516 197 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W CYC8P14922 966 aa1.82□□□□□ -2.12
CFT1YDR301W PUT4P15380 627 aa1.82□□□□□ -2.12
CFT1YDR301W SFL1P20134 766 aa1.82□□□□□ -2.12
CFT1YDR301W DPB3P27344 201 aa1.82□□□□□ -2.12
CFT1YDR301W SWI3P32591 825 aa1.82□□□□□ -2.12
CFT1YDR301W SAC6P32599 642 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W RRN6P32786 894 aa1.82□□□□□ -2.12
CFT1YDR301W RRP1P35178 278 aaPredicted RBP1.82□□□□□ -2.12
CFT1YDR301W FUI1P38196 639 aa1.82□□□□□ -2.12
CFT1YDR301W MSC7P38694 644 aa1.82□□□□□ -2.12
CFT1YDR301W DYS1P38791 387 aa1.82□□□□□ -2.12
CFT1YDR301W ESL1P40456 1118 aa1.82□□□□□ -2.12
CFT1YDR301W YFL052WP43551 465 aa1.82□□□□□ -2.12
CFT1YDR301W LAM5P43560 674 aa1.82□□□□□ -2.12
CFT1YDR301W ULI1P43604 169 aa1.82□□□□□ -2.12
CFT1YDR301W AVT1P47082 602 aa1.82□□□□□ -2.12
CFT1YDR301W ACF4P47129 309 aa1.82□□□□□ -2.12
CFT1YDR301W TAD1P53065 400 aa1.82□□□□□ -2.12
CFT1YDR301W BRE5P53741 515 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W ATG16Q03818 150 aa1.82□□□□□ -2.12
CFT1YDR301W NOC3Q07896 663 aaPredicted RBP1.82□□□□□ -2.12
CFT1YDR301W SIL1Q08199 421 aa1.82□□□□□ -2.12
CFT1YDR301W YPR027CQ12079 277 aa1.82□□□□□ -2.12
CFT1YDR301W CTF3Q12748 733 aa1.82□□□□□ -2.12
CFT1YDR301W YER152CP10356 443 aa1.82□□□□□ -2.12
CFT1YDR301W CLN2P20438 545 aa1.82□□□□□ -2.12
CFT1YDR301W PSO2P30620 661 aa1.82□□□□□ -2.12
CFT1YDR301W SYN8P31377 255 aa1.82□□□□□ -2.12
CFT1YDR301W ABD1P32783 436 aaPredicted RBP1.82□□□□□ -2.12
CFT1YDR301W SLA2P33338 968 aa1.82□□□□□ -2.12
CFT1YDR301W CSG2P35206 410 aa1.82□□□□□ -2.12
CFT1YDR301W ULP2P40537 1034 aaPredicted RBP1.82□□□□□ -2.12
CFT1YDR301W CEP3P40969 608 aa1.82□□□□□ -2.12
CFT1YDR301W CPR7P47103 393 aa1.82□□□□□ -2.12
CFT1YDR301W YNL058CP53947 316 aa1.82□□□□□ -2.12
CFT1YDR301W NGL3Q03210 505 aa1.82□□□□□ -2.12
CFT1YDR301W GIR2Q03768 265 aaPredicted RBP1.82□□□□□ -2.12
CFT1YDR301W YMR018WQ04364 514 aa1.82□□□□□ -2.12
CFT1YDR301W SML1Q04964 104 aa1.82□□□□□ -2.12
CFT1YDR301W GRX8Q05926 109 aa1.82□□□□□ -2.12
CFT1YDR301W TLG2Q08144 397 aa1.82□□□□□ -2.12
CFT1YDR301W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
CFT1YDR301W GAL80P04387 435 aa1.82□□□□□ -2.12
CFT1YDR301W HTA1P04911 132 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W HTA2P04912 132 aa1.82□□□□□ -2.12
CFT1YDR301W RAD57P25301 460 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms