RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	TIM54	P47045	478 aa		2.83	□□□□□ -1.96
CSN9	YDR179C	ZIP2	P53061	704 aa		2.83	□□□□□ -1.96
CSN9	YDR179C	CTK1	Q03957	528 aa	Known RBP	2.83	□□□□□ -1.96
CSN9	YDR179C	AFT2	Q08957	416 aa		2.83	□□□□□ -1.96
CSN9	YDR179C	TAF3	Q12297	353 aa		2.83	□□□□□ -1.96
CSN9	YDR179C	CLF1	Q12309	687 aa	Predicted RBP	2.83	□□□□□ -1.96
CSN9	YDR179C	YBR182C-A	Q8TGU6	64 aa		2.83	□□□□□ -1.96
CSN9	YDR179C	BNR1	P40450	1375 aa		2.83	□□□□□ -1.96
CSN9	YDR179C	YCL002C	P25565	263 aa		2.82	□□□□□ -1.96
CSN9	YDR179C	HIR1	P32479	840 aa		2.82	□□□□□ -1.96
CSN9	YDR179C	GLG1	P36143	616 aa		2.82	□□□□□ -1.96
CSN9	YDR179C	BDH2	P39713	417 aa		2.82	□□□□□ -1.96
CSN9	YDR179C	CTR1	P49573	406 aa		2.82	□□□□□ -1.96
CSN9	YDR179C	PRP31	P49704	494 aa	Predicted RBP	2.82	□□□□□ -1.96
CSN9	YDR179C	MET7	Q08645	548 aa		2.82	□□□□□ -1.96
CSN9	YDR179C	APL2	P36000	726 aa	Predicted RBP	2.81	□□□□□ -1.96
CSN9	YDR179C	TRZ1	P36159	838 aa	Predicted RBP	2.81	□□□□□ -1.96
CSN9	YDR179C	TEX1	P53851	422 aa	Known RBP	2.81	□□□□□ -1.96
CSN9	YDR179C	ASM4	Q05166	528 aa		2.81	□□□□□ -1.96
CSN9	YDR179C	FLC1	Q08967	793 aa		2.81	□□□□□ -1.96
CSN9	YDR179C	GPR1	Q12361	961 aa		2.81	□□□□□ -1.96
CSN9	YDR179C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
CSN9	YDR179C	SPC29	P33419	253 aa		2.8	□□□□□ -1.96
CSN9	YDR179C	YEL020C	P39994	560 aa		2.8	□□□□□ -1.96
CSN9	YDR179C	ATG4	P53867	494 aa		2.8	□□□□□ -1.96
CSN9	YDR179C	ORC4	P54791	529 aa		2.8	□□□□□ -1.96
CSN9	YDR179C	MCM21	Q06675	368 aa		2.8	□□□□□ -1.96
CSN9	YDR179C	GAL11	P19659	1081 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	CCR4	P31384	837 aa	Known RBP	2.79	□□□□□ -1.96
CSN9	YDR179C	MVD1	P32377	396 aa	Known RBP	2.79	□□□□□ -1.96
CSN9	YDR179C	ORC2	P32833	620 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	FLO10	P36170	1169 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	YHR020W	P38708	688 aa	Known RBP	2.79	□□□□□ -1.96
CSN9	YDR179C	ALY2	P47029	1046 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	MRK1	P50873	501 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	NOP7	P53261	605 aa	Known RBP	2.79	□□□□□ -1.96
CSN9	YDR179C	SEC5	P89102	971 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	ICT1	Q12385	394 aa		2.79	□□□□□ -1.96
CSN9	YDR179C	CAN1	P04817	590 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	NUP60	P39705	539 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	PAC2	P39937	518 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	CCT7	P42943	550 aa	Known RBP	2.78	□□□□□ -1.96
CSN9	YDR179C	HXT16	P47185	567 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	PAN2	P53010	1115 aa	Predicted RBP	2.78	□□□□□ -1.96
CSN9	YDR179C	FHN1	P53279	174 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	ARG5,6	Q01217	863 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	REC102	Q02721	264 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	THI7	Q05998	598 aa		2.78	□□□□□ -1.96
CSN9	YDR179C	MRI1	Q06489	411 aa	Known RBP	2.78	□□□□□ -1.96
CSN9	YDR179C	MDM10	P18409	493 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	BET3	P36149	193 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	SFB3	P38810	929 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	FMO1	P38866	432 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	RPN10	P38886	268 aa	Known RBP	2.77	□□□□□ -1.97
CSN9	YDR179C	YFL052W	P43551	465 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	BNA2	P47125	453 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	UBC9	P50623	157 aa	Predicted RBP	2.77	□□□□□ -1.97
CSN9	YDR179C	YAP7	Q08182	245 aa		2.77	□□□□□ -1.97
CSN9	YDR179C	SLK19	Q08581	821 aa	Known RBP	2.77	□□□□□ -1.97
CSN9	YDR179C	HOM2	P13663	365 aa	Known RBP	2.76	□□□□□ -1.97
CSN9	YDR179C	ABF1	P14164	731 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	ADE2	P21264	571 aa	Known RBP	2.76	□□□□□ -1.97
CSN9	YDR179C	VPS34	P22543	875 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	PER1	P25625	357 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	TMT1	P32643	299 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	YHR112C	P38716	378 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	MIP6	P38760	659 aa	Known RBP	2.76	□□□□□ -1.97
CSN9	YDR179C	RSP5	P39940	809 aa	Known RBP	2.76	□□□□□ -1.97
CSN9	YDR179C	GLO1	P50107	326 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	MTL1	P53214	551 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	SEG1	Q04279	960 aa		2.76	□□□□□ -1.97
CSN9	YDR179C	KCC4	P25389	1037 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	EMP70	P32802	667 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	PHO11	P35842	467 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	PHO12	P38693	467 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	MUP3	P38734	546 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	CHZ1	P40019	153 aa	Predicted RBP	2.75	□□□□□ -1.97
CSN9	YDR179C	HUL5	P53119	910 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	DIA2	Q08496	732 aa	Predicted RBP	2.75	□□□□□ -1.97
CSN9	YDR179C	ZRT2	Q12436	422 aa		2.75	□□□□□ -1.97
CSN9	YDR179C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
CSN9	YDR179C	STO1	P34160	861 aa	Known RBP	2.74	□□□□□ -1.97
CSN9	YDR179C	MTC2	P34246	357 aa		2.74	□□□□□ -1.97
CSN9	YDR179C	GMH1	P36125	273 aa		2.74	□□□□□ -1.97
CSN9	YDR179C	CRP1	P38845	465 aa	Known RBP	2.74	□□□□□ -1.97
CSN9	YDR179C	LTP1	P40347	161 aa		2.74	□□□□□ -1.97
CSN9	YDR179C	RTA1	P53047	317 aa		2.74	□□□□□ -1.97
CSN9	YDR179C	NPY1	P53164	384 aa		2.74	□□□□□ -1.97
CSN9	YDR179C	HMO1	Q03973	246 aa	Known RBP	2.74	□□□□□ -1.97
CSN9	YDR179C	YDR338C	Q05497	695 aa		2.74	□□□□□ -1.97
CSN9	YDR179C	GSY1	P23337	708 aa		2.73	□□□□□ -1.97
CSN9	YDR179C	PRP28	P23394	588 aa		2.73	□□□□□ -1.97
CSN9	YDR179C	PEX1	P24004	1043 aa		2.73	□□□□□ -1.97
CSN9	YDR179C	FUB1	P25659	250 aa		2.73	□□□□□ -1.97
CSN9	YDR179C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
CSN9	YDR179C	LYS9	P38999	446 aa		2.73	□□□□□ -1.97
CSN9	YDR179C	GDH3	P39708	457 aa		2.73	□□□□□ -1.97
CSN9	YDR179C	SNP1	Q00916	300 aa	Predicted RBP	2.73	□□□□□ -1.97
CSN9	YDR179C	BMS1	Q08965	1183 aa	Known RBP	2.73	□□□□□ -1.97
CSN9	YDR179C	YOR131C	Q12486	218 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms