RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C OYE2Q03558 400 aaKnown RBP1.23□□□□□ -2.21
SEC1YDR164C ATE1P16639 503 aa1.22□□□□□ -2.21
SEC1YDR164C SAT4P25333 603 aaKnown RBP1.22□□□□□ -2.21
SEC1YDR164C EUG1P32474 517 aa1.22□□□□□ -2.21
SEC1YDR164C MAD1P40957 749 aa1.22□□□□□ -2.21
SEC1YDR164C HAL9Q12180 1030 aa1.22□□□□□ -2.21
SEC1YDR164C YOR022CQ12204 715 aa1.22□□□□□ -2.21
SEC1YDR164C UGP1P32861 499 aaKnown RBP1.21□□□□□ -2.22
SEC1YDR164C SFB3P38810 929 aa1.21□□□□□ -2.22
SEC1YDR164C CCT4P39078 528 aaKnown RBP1.21□□□□□ -2.22
SEC1YDR164C TOK1P40310 691 aa1.21□□□□□ -2.22
SEC1YDR164C FAA4P47912 694 aaKnown RBP1.21□□□□□ -2.22
SEC1YDR164C PAN2P53010 1115 aaPredicted RBP1.21□□□□□ -2.22
SEC1YDR164C SPC98P53540 846 aa1.21□□□□□ -2.22
SEC1YDR164C YPL068CQ02749 293 aa1.21□□□□□ -2.22
SEC1YDR164C TOP3P13099 656 aa1.21□□□□□ -2.22
SEC1YDR164C TSR4P25040 408 aa1.21□□□□□ -2.22
SEC1YDR164C FUB1P25659 250 aa1.21□□□□□ -2.22
SEC1YDR164C TRZ1P36159 838 aaPredicted RBP1.21□□□□□ -2.22
SEC1YDR164C UBS1P38290 277 aa1.21□□□□□ -2.22
SEC1YDR164C SPC97P38863 823 aa1.21□□□□□ -2.22
SEC1YDR164C SET5P38890 526 aaKnown RBP1.21□□□□□ -2.22
SEC1YDR164C IRR1P40541 1150 aa1.21□□□□□ -2.22
SEC1YDR164C SHR5P41912 237 aa1.21□□□□□ -2.22
SEC1YDR164C ZDS1P50111 915 aaKnown RBP1.21□□□□□ -2.22
SEC1YDR164C YML020WQ03722 664 aa1.21□□□□□ -2.22
SEC1YDR164C ENT2Q05785 613 aa1.21□□□□□ -2.22
SEC1YDR164C REH1Q06709 432 aa1.21□□□□□ -2.22
SEC1YDR164C PHR1P05066 565 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
SEC1YDR164C DAL7P21826 554 aa1.2□□□□□ -2.22
SEC1YDR164C NUP60P39705 539 aa1.2□□□□□ -2.22
SEC1YDR164C TEX1P53851 422 aaKnown RBP1.2□□□□□ -2.22
SEC1YDR164C NOP8Q08287 484 aaPredicted RBP1.2□□□□□ -2.22
SEC1YDR164C ZRT2Q12436 422 aa1.2□□□□□ -2.22
SEC1YDR164C STE12P13574 688 aa1.2□□□□□ -2.22
SEC1YDR164C AFR1P33304 620 aa1.2□□□□□ -2.22
SEC1YDR164C PHO11P35842 467 aa1.2□□□□□ -2.22
SEC1YDR164C PHO12P38693 467 aa1.2□□□□□ -2.22
SEC1YDR164C IRC8P47046 822 aa1.2□□□□□ -2.22
SEC1YDR164C PRP31P49704 494 aaPredicted RBP1.2□□□□□ -2.22
SEC1YDR164C ORC4P54791 529 aa1.2□□□□□ -2.22
SEC1YDR164C OPI10Q08202 246 aa1.2□□□□□ -2.22
SEC1YDR164C YPR071WQ12346 211 aa1.2□□□□□ -2.22
SEC1YDR164C PMC1P38929 1173 aaPredicted RBP1.19□□□□□ -2.22
SEC1YDR164C CCT5P40413 562 aaKnown RBP1.19□□□□□ -2.22
SEC1YDR164C FHN1P53279 174 aa1.19□□□□□ -2.22
SEC1YDR164C YDR514CQ04408 483 aa1.19□□□□□ -2.22
SEC1YDR164C SVF1Q05515 481 aa1.19□□□□□ -2.22
SEC1YDR164C DIA2Q08496 732 aaPredicted RBP1.19□□□□□ -2.22
SEC1YDR164C ULA1Q12059 462 aa1.19□□□□□ -2.22
SEC1YDR164C YOR111WQ99210 232 aa1.19□□□□□ -2.22
SEC1YDR164C ERT1P38140 529 aa1.18□□□□□ -2.22
SEC1YDR164C TAX4P47030 604 aa1.18□□□□□ -2.22
SEC1YDR164C EAF1Q06337 982 aa1.18□□□□□ -2.22
SEC1YDR164C RRP15Q06511 250 aaPredicted RBP1.18□□□□□ -2.22
SEC1YDR164C BMS1Q08965 1183 aaKnown RBP1.18□□□□□ -2.22
SEC1YDR164C ENV7Q12003 364 aa1.18□□□□□ -2.22
SEC1YDR164C USV1Q12132 391 aa1.18□□□□□ -2.22
SEC1YDR164C MDM20Q12387 796 aaKnown RBP1.18□□□□□ -2.22
SEC1YDR164C DIF1O13577 133 aa1.18□□□□□ -2.22
SEC1YDR164C MRPL9P31334 269 aa1.18□□□□□ -2.22
SEC1YDR164C APL2P36000 726 aaPredicted RBP1.18□□□□□ -2.22
SEC1YDR164C FMO1P38866 432 aa1.18□□□□□ -2.22
SEC1YDR164C TAD1P53065 400 aa1.18□□□□□ -2.22
SEC1YDR164C MTL1P53214 551 aa1.18□□□□□ -2.22
SEC1YDR164C LSC1P53598 329 aaKnown RBP1.18□□□□□ -2.22
SEC1YDR164C ERG13P54839 491 aaKnown RBP1.18□□□□□ -2.22
SEC1YDR164C MCM21Q06675 368 aa1.18□□□□□ -2.22
SEC1YDR164C MLH3Q12083 715 aa1.18□□□□□ -2.22
SEC1YDR164C HOT13P36078 116 aa1.17□□□□□ -2.22
SEC1YDR164C PET10P36139 283 aa1.17□□□□□ -2.22
SEC1YDR164C APL3P38065 1025 aa1.17□□□□□ -2.22
SEC1YDR164C DED81P38707 554 aaKnown RBP1.17□□□□□ -2.22
SEC1YDR164C CRP1P38845 465 aaKnown RBP1.17□□□□□ -2.22
SEC1YDR164C JHD1P40034 492 aa1.17□□□□□ -2.22
SEC1YDR164C MAF1P41910 395 aa1.17□□□□□ -2.22
SEC1YDR164C ALR2P43553 858 aa1.17□□□□□ -2.22
SEC1YDR164C BUL2Q03758 920 aaKnown RBP1.17□□□□□ -2.22
SEC1YDR164C SPO75Q07798 868 aa1.17□□□□□ -2.22
SEC1YDR164C THI21Q08975 551 aa1.17□□□□□ -2.22
SEC1YDR164C THR1P17423 357 aaKnown RBP1.17□□□□□ -2.22
SEC1YDR164C EMC3P36039 253 aa1.17□□□□□ -2.22
SEC1YDR164C YBR284WP38150 797 aa1.17□□□□□ -2.22
SEC1YDR164C PIG2P40187 538 aa1.17□□□□□ -2.22
SEC1YDR164C ZIP2P53061 704 aa1.17□□□□□ -2.22
SEC1YDR164C YGR151CP53287 111 aa1.17□□□□□ -2.22
SEC1YDR164C ORC1P54784 914 aaPredicted RBP1.17□□□□□ -2.22
SEC1YDR164C REC102Q02721 264 aa1.17□□□□□ -2.22
SEC1YDR164C TPK2P06245 380 aa1.16□□□□□ -2.22
SEC1YDR164C PRI2P20457 528 aa1.16□□□□□ -2.22
SEC1YDR164C PRP28P23394 588 aa1.16□□□□□ -2.22
SEC1YDR164C MBR1P23493 339 aa1.16□□□□□ -2.22
SEC1YDR164C YMC1P32331 307 aa1.16□□□□□ -2.22
SEC1YDR164C HBS1P32769 611 aaKnown RBP1.16□□□□□ -2.22
SEC1YDR164C YMC2P38087 329 aa1.16□□□□□ -2.22
SEC1YDR164C YAT2P40017 923 aa1.16□□□□□ -2.22
SEC1YDR164C PCI8P40512 444 aa1.16□□□□□ -2.22
SEC1YDR164C MNT3P40549 630 aa1.16□□□□□ -2.22
SEC1YDR164C RLP7P40693 322 aaKnown RBP1.16□□□□□ -2.22
SEC1YDR164C ENP2P48234 707 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms