RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDS1	YDR113C	MUK1	Q02866	612 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	NTG2	Q08214	380 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	FRE5	Q08908	694 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	SRD1	P09007	221 aa		4.79	□□□□□ -1.64
PDS1	YDR113C	CAF20	P12962	161 aa	Known RBP	4.79	□□□□□ -1.64
PDS1	YDR113C	GSY1	P23337	708 aa		4.79	□□□□□ -1.64
PDS1	YDR113C	MTR3	P48240	250 aa	Predicted RBP	4.79	□□□□□ -1.64
PDS1	YDR113C	GND2	P53319	492 aa		4.79	□□□□□ -1.64
PDS1	YDR113C	ADY4	Q05955	493 aa		4.79	□□□□□ -1.64
PDS1	YDR113C	Q0142	Q9ZZW4	58 aa		4.79	□□□□□ -1.64
PDS1	YDR113C	NUG1	P40010	520 aa	Known RBP	4.78	□□□□□ -1.64
PDS1	YDR113C	RTS3	P53289	263 aa		4.78	□□□□□ -1.64
PDS1	YDR113C	MET6	P05694	767 aa	Known RBP	4.77	□□□□□ -1.65
PDS1	YDR113C	HOG1	P32485	435 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	RRP14	P36080	434 aa	Known RBP	4.77	□□□□□ -1.65
PDS1	YDR113C	PPS1	P38148	807 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	YBR259W	P38338	688 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	HOS4	P40480	1083 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	YIR042C	P40586	236 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	SNM1	P40993	198 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	AMA1	P50082	593 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	ALG12	P53730	551 aa		4.77	□□□□□ -1.65
PDS1	YDR113C	LGE1	Q02796	332 aa	Known RBP	4.77	□□□□□ -1.65
PDS1	YDR113C	POB3	Q04636	552 aa	Known RBP	4.77	□□□□□ -1.65
PDS1	YDR113C	YKR051W	P36142	418 aa		4.76	□□□□□ -1.65
PDS1	YDR113C	MIP6	P38760	659 aa	Known RBP	4.76	□□□□□ -1.65
PDS1	YDR113C	RPN10	P38886	268 aa	Known RBP	4.76	□□□□□ -1.65
PDS1	YDR113C	YJR008W	P47085	338 aa		4.76	□□□□□ -1.65
PDS1	YDR113C	TEX1	P53851	422 aa	Known RBP	4.76	□□□□□ -1.65
PDS1	YDR113C	HBT1	Q07653	1046 aa	Known RBP	4.76	□□□□□ -1.65
PDS1	YDR113C	YLR001C	Q07895	862 aa		4.76	□□□□□ -1.65
PDS1	YDR113C	RAD18	P10862	487 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	LAT1	P12695	482 aa	Known RBP	4.75	□□□□□ -1.65
PDS1	YDR113C	PCL2	P25693	308 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	PPG1	P32838	368 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	FPR3	P38911	411 aa	Known RBP	4.75	□□□□□ -1.65
PDS1	YDR113C	ECM1	P39715	212 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	BAP3	P41815	604 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	YJL163C	P46996	555 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	NPY1	P53164	384 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	NHX1	Q04121	633 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	IRC13	Q08630	104 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	NDJ1	Q12366	352 aa		4.75	□□□□□ -1.65
PDS1	YDR113C	ADE2	P21264	571 aa	Known RBP	4.74	□□□□□ -1.65
PDS1	YDR113C	SDS3	P40505	327 aa		4.74	□□□□□ -1.65
PDS1	YDR113C	YFL052W	P43551	465 aa		4.74	□□□□□ -1.65
PDS1	YDR113C	PRP31	P49704	494 aa	Predicted RBP	4.74	□□□□□ -1.65
PDS1	YDR113C	ATG33	Q06485	197 aa		4.74	□□□□□ -1.65
PDS1	YDR113C	YEL1	P34225	687 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	YKR018C	P36114	725 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	HSL7	P38274	827 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	PCM1	P38628	557 aa	Known RBP	4.73	□□□□□ -1.65
PDS1	YDR113C	YHR112C	P38716	378 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	YHL017W	P38745	532 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	DAS1	P47005	663 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	UBC9	P50623	157 aa	Predicted RBP	4.73	□□□□□ -1.65
PDS1	YDR113C	ARP4	P80428	489 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	ARG5,6	Q01217	863 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
PDS1	YDR113C	ATG11	Q12527	1178 aa		4.73	□□□□□ -1.65
PDS1	YDR113C	HMG1	P12683	1054 aa		4.72	□□□□□ -1.65
PDS1	YDR113C	APL2	P36000	726 aa	Predicted RBP	4.72	□□□□□ -1.65
PDS1	YDR113C	BCD1	P38772	366 aa		4.72	□□□□□ -1.65
PDS1	YDR113C	LYS9	P38999	446 aa		4.72	□□□□□ -1.65
PDS1	YDR113C	AIM14	P53109	570 aa		4.72	□□□□□ -1.65
PDS1	YDR113C	COG8	Q04632	607 aa		4.72	□□□□□ -1.65
PDS1	YDR113C	GAD1	Q04792	585 aa		4.72	□□□□□ -1.65
PDS1	YDR113C	RPN7	Q06103	429 aa	Known RBP	4.72	□□□□□ -1.65
PDS1	YDR113C	SFL1	P20134	766 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	ERG6	P25087	383 aa	Known RBP	4.71	□□□□□ -1.66
PDS1	YDR113C	SWE1	P32944	819 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	TOM20	P35180	183 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	UBC11	P52492	156 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	PCL10	P53124	433 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	YBP2	P53169	641 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	MTL1	P53214	551 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	YNL193W	P53870	558 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	ORC4	P54791	529 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	LEE1	Q02799	301 aa	Known RBP	4.71	□□□□□ -1.66
PDS1	YDR113C	TFB2	Q02939	513 aa		4.71	□□□□□ -1.66
PDS1	YDR113C	CCR4	P31384	837 aa	Known RBP	4.7	□□□□□ -1.66
PDS1	YDR113C	GID8	P40208	455 aa		4.7	□□□□□ -1.66
PDS1	YDR113C	MET13	P53128	600 aa		4.7	□□□□□ -1.66
PDS1	YDR113C	SUB1	P54000	292 aa	Known RBP	4.7	□□□□□ -1.66
PDS1	YDR113C	HMO1	Q03973	246 aa	Known RBP	4.7	□□□□□ -1.66
PDS1	YDR113C	RGC1	Q06108	1083 aa	Known RBP	4.7	□□□□□ -1.66
PDS1	YDR113C	MCM21	Q06675	368 aa		4.7	□□□□□ -1.66
PDS1	YDR113C	MRH1	Q12117	320 aa	Predicted RBP	4.7	□□□□□ -1.66
PDS1	YDR113C	HRP1	Q99383	534 aa	Known RBP	4.7	□□□□□ -1.66
PDS1	YDR113C	RPL8A	P17076	256 aa	Known RBP	4.69	□□□□□ -1.66
PDS1	YDR113C	TSR4	P25040	408 aa		4.69	□□□□□ -1.66
PDS1	YDR113C	HIR1	P32479	840 aa		4.69	□□□□□ -1.66
PDS1	YDR113C	FMP52	P40008	231 aa		4.69	□□□□□ -1.66
PDS1	YDR113C	GIN4	Q12263	1142 aa		4.69	□□□□□ -1.66
PDS1	YDR113C	NOP14	Q99207	810 aa	Known RBP	4.69	□□□□□ -1.66
PDS1	YDR113C	SIR3	P06701	978 aa		4.68	□□□□□ -1.66
PDS1	YDR113C	HIS7	P33734	552 aa	Known RBP	4.68	□□□□□ -1.66
PDS1	YDR113C	MNN4	P36044	1178 aa		4.68	□□□□□ -1.66
PDS1	YDR113C	TRZ1	P36159	838 aa	Predicted RBP	4.68	□□□□□ -1.66
PDS1	YDR113C	BRE5	P53741	515 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 618.2 ms