RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SUT2Q12286 268 aa10.14□□□□□ -0.79
SED1YDR077W ZRT2Q12436 422 aa10.14□□□□□ -0.79
SED1YDR077W ASP3-2P0CX77 362 aa10.13□□□□□ -0.79
SED1YDR077W ASP3-3P0CX78 362 aa10.13□□□□□ -0.79
SED1YDR077W ASP3-4P0CX79 362 aa10.13□□□□□ -0.79
SED1YDR077W ASP3-1P0CZ17 362 aa10.13□□□□□ -0.79
SED1YDR077W RPL4AP10664 362 aaKnown RBP10.13□□□□□ -0.79
SED1YDR077W OXP1P28273 1286 aa10.13□□□□□ -0.79
SED1YDR077W DYS1P38791 387 aa10.13□□□□□ -0.79
SED1YDR077W SAD1P43589 448 aa10.13□□□□□ -0.79
SED1YDR077W RPC17P47076 161 aa10.13□□□□□ -0.79
SED1YDR077W RPL4BP49626 362 aaKnown RBP10.13□□□□□ -0.79
SED1YDR077W NCS6P53088 359 aa10.13□□□□□ -0.79
SED1YDR077W DRN1P53255 507 aaKnown RBP10.13□□□□□ -0.79
SED1YDR077W ECM3Q99252 613 aa10.13□□□□□ -0.79
SED1YDR077W RNR1P21524 888 aaKnown RBP10.12□□□□□ -0.79
SED1YDR077W RRT12P25381 491 aa10.12□□□□□ -0.79
SED1YDR077W SPT5P27692 1063 aaKnown RBP10.12□□□□□ -0.79
SED1YDR077W RRN6P32786 894 aa10.12□□□□□ -0.79
SED1YDR077W BUD2P33314 1104 aa10.12□□□□□ -0.79
SED1YDR077W TDA3P38758 523 aa10.12□□□□□ -0.79
SED1YDR077W KAP123P40069 1113 aaKnown RBP10.12□□□□□ -0.79
SED1YDR077W DIG1Q03063 452 aaKnown RBP10.12□□□□□ -0.79
SED1YDR077W VPS72Q03388 795 aa10.12□□□□□ -0.79
SED1YDR077W ERV41Q04651 352 aa10.12□□□□□ -0.79
SED1YDR077W GLN3P18494 730 aa10.11□□□□□ -0.79
SED1YDR077W DBF4P32325 704 aa10.11□□□□□ -0.79
SED1YDR077W NFU1P32860 256 aa10.11□□□□□ -0.79
SED1YDR077W DUR3P33413 735 aa10.11□□□□□ -0.79
SED1YDR077W PHO86P46956 311 aa10.11□□□□□ -0.79
SED1YDR077W URH1Q04179 340 aa10.11□□□□□ -0.79
SED1YDR077W VTI1Q04338 217 aa10.11□□□□□ -0.79
SED1YDR077W NUR1Q12066 484 aa10.11□□□□□ -0.79
SED1YDR077W CDC8P00572 216 aa10.1□□□□□ -0.79
SED1YDR077W COX4P04037 155 aa10.1□□□□□ -0.79
SED1YDR077W YER152CP10356 443 aa10.1□□□□□ -0.79
SED1YDR077W ADE2P21264 571 aaKnown RBP10.1□□□□□ -0.79
SED1YDR077W VMA4P22203 233 aaKnown RBP10.1□□□□□ -0.79
SED1YDR077W PRR1P28708 518 aa10.1□□□□□ -0.79
SED1YDR077W NCL1P38205 684 aaKnown RBP10.1□□□□□ -0.79
SED1YDR077W YHR054CP38780 354 aa10.1□□□□□ -0.79
SED1YDR077W LAM5P43560 674 aa10.1□□□□□ -0.79
SED1YDR077W YMR1P47147 688 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79 RIP-Chip
SED1YDR077W ISM1P48526 1002 aa10.1□□□□□ -0.79
SED1YDR077W BRO1P48582 844 aa10.1□□□□□ -0.79
SED1YDR077W YDR222WQ04925 415 aa10.1□□□□□ -0.79
SED1YDR077W YLR455WQ06188 304 aa10.1□□□□□ -0.79
SED1YDR077W MDM20Q12387 796 aaKnown RBP10.1□□□□□ -0.79
SED1YDR077W RMP1Q12530 201 aa10.1□□□□□ -0.79
SED1YDR077W LAA1P39526 2014 aa10.1□□□□□ -0.79
SED1YDR077W YLR462WO13556 202 aa10.09□□□□□ -0.79
SED1YDR077W GAL10P04397 699 aa10.09□□□□□ -0.79
SED1YDR077W RPT1P33299 467 aaKnown RBP10.09□□□□□ -0.79
SED1YDR077W RRT2P38332 387 aa10.09□□□□□ -0.79
SED1YDR077W YHL049CP38722 271 aa10.09□□□□□ -0.79
SED1YDR077W SAH1P39954 449 aaKnown RBP10.09□□□□□ -0.79
SED1YDR077W YEL075CP39972 122 aa10.09□□□□□ -0.79
SED1YDR077W YER189WP40104 122 aa10.09□□□□□ -0.79
SED1YDR077W YFL064CP43540 174 aa10.09□□□□□ -0.79
SED1YDR077W ULI1P43604 169 aa10.09□□□□□ -0.79
SED1YDR077W ALG11P53954 548 aaKnown RBP10.09□□□□□ -0.79
SED1YDR077W EEB1Q02891 456 aa10.09□□□□□ -0.79
SED1YDR077W ATG16Q03818 150 aa10.09□□□□□ -0.79
SED1YDR077W DOT1Q04089 582 aaKnown RBP10.09□□□□□ -0.79
SED1YDR077W ECI1Q05871 280 aa10.09□□□□□ -0.79
SED1YDR077W NOP6Q07623 225 aaKnown RBP10.09□□□□□ -0.79
SED1YDR077W PUF3Q07807 879 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
SED1YDR077W PUS1Q12211 544 aaKnown RBP10.09□□□□□ -0.79
SED1YDR077W MAM3Q12296 706 aa10.09□□□□□ -0.79
SED1YDR077W SPO21Q12411 609 aa10.09□□□□□ -0.79
SED1YDR077W YBL111CQ3E7Y5 667 aa10.09□□□□□ -0.79
SED1YDR077W ADE4P04046 510 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W EFB1P32471 206 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W GCG1P32656 232 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W OLA1P38219 394 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W AFG3P39925 761 aa10.08□□□□□ -0.8
SED1YDR077W ALD5P40047 520 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W LCP5P40079 357 aaPredicted RBP10.08□□□□□ -0.8
SED1YDR077W AZR1P50080 613 aa10.08□□□□□ -0.8
SED1YDR077W YNL134CP53912 376 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W APL5Q08951 932 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W RIO1Q12196 484 aaKnown RBP10.08□□□□□ -0.8
SED1YDR077W SCJ1P25303 377 aa10.07□□□□□ -0.8
SED1YDR077W PAH1P32567 862 aa10.07□□□□□ -0.8
SED1YDR077W UBC6P33296 250 aaPredicted RBP10.07□□□□□ -0.8
SED1YDR077W PTC4P38089 393 aa10.07□□□□□ -0.8
SED1YDR077W YAP1801P38856 637 aa10.07□□□□□ -0.8
SED1YDR077W SAK1P38990 1142 aa10.07□□□□□ -0.8
SED1YDR077W AIM21P40563 679 aa10.07□□□□□ -0.8
SED1YDR077W HOP2P53187 214 aa10.07□□□□□ -0.8
SED1YDR077W VPS62P53285 467 aa10.07□□□□□ -0.8
SED1YDR077W ULP1Q02724 621 aa10.07□□□□□ -0.8
SED1YDR077W AIM41Q12032 185 aa10.07□□□□□ -0.8
SED1YDR077W PCD1Q12524 340 aa10.07□□□□□ -0.8
SED1YDR077W GYP6P32806 458 aa10.06□□□□□ -0.8
SED1YDR077W SEG2P34250 1132 aa10.06□□□□□ -0.8
SED1YDR077W DRE2P36152 348 aa10.06□□□□□ -0.8
SED1YDR077W CBR1P38626 284 aaKnown RBP10.06□□□□□ -0.8
SED1YDR077W PMC1P38929 1173 aaPredicted RBP10.06□□□□□ -0.8
SED1YDR077W MIC19P43594 170 aa10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms