RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MVD1P32377 396 aaKnown RBP2.7□□□□□ -1.98
CDC36YDL165W STE5P32917 917 aa2.7□□□□□ -1.98
CDC36YDL165W PHO11P35842 467 aa2.7□□□□□ -1.98
CDC36YDL165W YBR284WP38150 797 aa2.7□□□□□ -1.98
CDC36YDL165W PHO12P38693 467 aa2.7□□□□□ -1.98
CDC36YDL165W FMP30Q02883 468 aa2.7□□□□□ -1.98
CDC36YDL165W THI21Q08975 551 aa2.7□□□□□ -1.98
CDC36YDL165W MLH3Q12083 715 aa2.7□□□□□ -1.98
CDC36YDL165W PRP9P19736 530 aaKnown RBP2.69□□□□□ -1.98
CDC36YDL165W APN1P22936 367 aa2.69□□□□□ -1.98
CDC36YDL165W LYS9P38999 446 aa2.69□□□□□ -1.98
CDC36YDL165W ECM1P39715 212 aa2.69□□□□□ -1.98
CDC36YDL165W TAD1P53065 400 aa2.69□□□□□ -1.98
CDC36YDL165W YPL068CQ02749 293 aa2.69□□□□□ -1.98
CDC36YDL165W MSD1P15179 658 aaKnown RBP2.68□□□□□ -1.98
CDC36YDL165W RPA135P22138 1203 aaKnown RBP2.68□□□□□ -1.98
CDC36YDL165W FUB1P25659 250 aa2.68□□□□□ -1.98
CDC36YDL165W CDC11P32458 415 aa2.68□□□□□ -1.98
CDC36YDL165W PET10P36139 283 aa2.68□□□□□ -1.98
CDC36YDL165W NUP60P39705 539 aa2.68□□□□□ -1.98
CDC36YDL165W MTR3P48240 250 aaPredicted RBP2.68□□□□□ -1.98
CDC36YDL165W NIT3P49954 291 aa2.68□□□□□ -1.98
CDC36YDL165W RGC1Q06108 1083 aaKnown RBP2.68□□□□□ -1.98
CDC36YDL165W PIN2Q12057 282 aa2.68□□□□□ -1.98
CDC36YDL165W MBR1P23493 339 aa2.67□□□□□ -1.98
CDC36YDL165W SAP190P36123 1033 aa2.67□□□□□ -1.98
CDC36YDL165W PFD1P46988 109 aa2.67□□□□□ -1.98
CDC36YDL165W CTK1Q03957 528 aaKnown RBP2.67□□□□□ -1.98
CDC36YDL165W THR1P17423 357 aaKnown RBP2.66□□□□□ -1.98
CDC36YDL165W GMH1P36125 273 aa2.66□□□□□ -1.98
CDC36YDL165W SET5P38890 526 aaKnown RBP2.66□□□□□ -1.98
CDC36YDL165W MAD1P40957 749 aa2.66□□□□□ -1.98
CDC36YDL165W STP1Q00947 519 aa2.66□□□□□ -1.98
CDC36YDL165W USV1Q12132 391 aa2.66□□□□□ -1.98
CDC36YDL165W ADE5,7P07244 802 aaKnown RBP2.65□□□□□ -1.99
CDC36YDL165W STE12P13574 688 aa2.65□□□□□ -1.99
CDC36YDL165W SAT4P25333 603 aaKnown RBP2.65□□□□□ -1.99
CDC36YDL165W YMC1P32331 307 aa2.65□□□□□ -1.99
CDC36YDL165W EMC3P36039 253 aa2.65□□□□□ -1.99
CDC36YDL165W SET3P36124 751 aa2.65□□□□□ -1.99
CDC36YDL165W YBR184WP38299 523 aa2.65□□□□□ -1.99
CDC36YDL165W YHR112CP38716 378 aa2.65□□□□□ -1.99
CDC36YDL165W ALR2P43553 858 aa2.65□□□□□ -1.99
CDC36YDL165W TAX4P47030 604 aa2.65□□□□□ -1.99
CDC36YDL165W PRP31P49704 494 aaPredicted RBP2.65□□□□□ -1.99
CDC36YDL165W ZIP2P53061 704 aa2.65□□□□□ -1.99
CDC36YDL165W KCC4P25389 1037 aa2.64□□□□□ -1.99
CDC36YDL165W YMC2P38087 329 aa2.64□□□□□ -1.99
CDC36YDL165W SPF1P39986 1215 aaKnown RBP2.64□□□□□ -1.99
CDC36YDL165W ULP2P40537 1034 aaPredicted RBP2.64□□□□□ -1.99
CDC36YDL165W GIS2P53849 153 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
CDC36YDL165W HFD1Q04458 532 aa2.64□□□□□ -1.99
CDC36YDL165W EAF1Q06337 982 aa2.64□□□□□ -1.99
CDC36YDL165W ZRT2Q12436 422 aa2.64□□□□□ -1.99
CDC36YDL165W HBN1Q96VH4 193 aa2.64□□□□□ -1.99
CDC36YDL165W ADE2P21264 571 aaKnown RBP2.63□□□□□ -1.99
CDC36YDL165W ERG6P25087 383 aaKnown RBP2.63□□□□□ -1.99
CDC36YDL165W SCT1P32784 759 aa2.63□□□□□ -1.99
CDC36YDL165W UGP1P32861 499 aaKnown RBP2.63□□□□□ -1.99
CDC36YDL165W MIT1P40002 666 aa2.63□□□□□ -1.99
CDC36YDL165W CCT5P40413 562 aaKnown RBP2.63□□□□□ -1.99
CDC36YDL165W GYP8P43570 497 aa2.63□□□□□ -1.99
CDC36YDL165W YBP2P53169 641 aa2.63□□□□□ -1.99
CDC36YDL165W FMP25Q08023 583 aa2.63□□□□□ -1.99
CDC36YDL165W YBR182C-AQ8TGU6 64 aa2.63□□□□□ -1.99
CDC36YDL165W HRP1Q99383 534 aaKnown RBP2.63□□□□□ -1.99
CDC36YDL165W APL2P36000 726 aaPredicted RBP2.62□□□□□ -1.99
CDC36YDL165W TRZ1P36159 838 aaPredicted RBP2.62□□□□□ -1.99
CDC36YDL165W PMC1P38929 1173 aaPredicted RBP2.62□□□□□ -1.99
CDC36YDL165W IRC8P47046 822 aa2.62□□□□□ -1.99
CDC36YDL165W UTP8P53276 713 aaKnown RBP2.62□□□□□ -1.99
CDC36YDL165W YGR283CP53336 341 aaPredicted RBP2.62□□□□□ -1.99
CDC36YDL165W PHO5P00635 467 aa2.61□□□□□ -1.99
CDC36YDL165W PSA1P41940 361 aaKnown RBP2.61□□□□□ -1.99
CDC36YDL165W SPC98P53540 846 aa2.61□□□□□ -1.99
CDC36YDL165W ARG5,6Q01217 863 aa2.61□□□□□ -1.99
CDC36YDL165W YML020WQ03722 664 aa2.61□□□□□ -1.99
CDC36YDL165W TDA5Q06417 326 aaKnown RBP2.61□□□□□ -1.99
CDC36YDL165W UBX5Q06682 500 aa2.61□□□□□ -1.99
CDC36YDL165W REH1Q06709 432 aa2.61□□□□□ -1.99
CDC36YDL165W ULA1Q12059 462 aa2.61□□□□□ -1.99
CDC36YDL165W CLF1Q12309 687 aaPredicted RBP2.61□□□□□ -1.99
CDC36YDL165W HOT13P36078 116 aa2.6□□□□□ -1.99
CDC36YDL165W CRP1P38845 465 aaKnown RBP2.6□□□□□ -1.99
CDC36YDL165W SHR5P41912 237 aa2.6□□□□□ -1.99
CDC36YDL165W ASN1P49089 572 aaKnown RBP2.6□□□□□ -1.99
CDC36YDL165W YGR151CP53287 111 aa2.6□□□□□ -1.99
CDC36YDL165W NOP8Q08287 484 aaPredicted RBP2.6□□□□□ -1.99
CDC36YDL165W NOP1P15646 327 aaKnown RBP2.59□□□□□ -1.99
CDC36YDL165W NAP1P25293 417 aaKnown RBP2.59□□□□□ -1.99
CDC36YDL165W ECM32P32644 1121 aaKnown RBP2.59□□□□□ -1.99
CDC36YDL165W GET2P40056 285 aa2.59□□□□□ -1.99
CDC36YDL165W RLP7P40693 322 aaKnown RBP2.59□□□□□ -1.99
CDC36YDL165W UBP6P43593 499 aaKnown RBP2.59□□□□□ -1.99
CDC36YDL165W HXT16P47185 567 aa2.59□□□□□ -1.99
CDC36YDL165W MCM21Q06675 368 aa2.59□□□□□ -1.99
CDC36YDL165W DIF1O13577 133 aa2.58□□□□□ -2
CDC36YDL165W KSP1P38691 1029 aaKnown RBP2.58□□□□□ -2
CDC36YDL165W ZDS1P50111 915 aaKnown RBP2.58□□□□□ -2
CDC36YDL165W YDR514CQ04408 483 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 180.7 ms