RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	NTG2	Q08214	380 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	MCH5	Q08777	521 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	HSL7	P38274	827 aa		6.11	□□□□□ -1.43
UBS1	YBR165W	MIP6	P38760	659 aa	Known RBP	6.11	□□□□□ -1.43
UBS1	YBR165W	HOS4	P40480	1083 aa		6.11	□□□□□ -1.43
UBS1	YBR165W	DAS1	P47005	663 aa		6.11	□□□□□ -1.43
UBS1	YBR165W	YBP2	P53169	641 aa		6.11	□□□□□ -1.43
UBS1	YBR165W	TEX1	P53851	422 aa	Known RBP	6.11	□□□□□ -1.43
UBS1	YBR165W	TIM44	Q01852	431 aa		6.11	□□□□□ -1.43
UBS1	YBR165W	MUK1	Q02866	612 aa		6.11	□□□□□ -1.43
UBS1	YBR165W	YHL017W	P38745	532 aa		6.1	□□□□□ -1.43
UBS1	YBR165W	PRP31	P49704	494 aa	Predicted RBP	6.1	□□□□□ -1.43
UBS1	YBR165W	YMR206W	Q03695	313 aa		6.1	□□□□□ -1.43
UBS1	YBR165W	TMN2	Q04562	672 aa		6.1	□□□□□ -1.43
UBS1	YBR165W	Q0142	Q9ZZW4	58 aa		6.1	□□□□□ -1.43
UBS1	YBR165W	PCL2	P25693	308 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	APL2	P36000	726 aa	Predicted RBP	6.09	□□□□□ -1.43
UBS1	YBR165W	YKR018C	P36114	725 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	YKR051W	P36142	418 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	RNH70	P53331	553 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	ALG12	P53730	551 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	ARG5,6	Q01217	863 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	GAD1	Q04792	585 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	TAD3	Q9URQ3	322 aa		6.09	□□□□□ -1.43
UBS1	YBR165W	ADE2	P21264	571 aa	Known RBP	6.08	□□□□□ -1.44
UBS1	YBR165W	UBA2	P52488	636 aa		6.08	□□□□□ -1.44
UBS1	YBR165W	ORC1	P54784	914 aa	Predicted RBP	6.08	□□□□□ -1.44
UBS1	YBR165W	ORC4	P54791	529 aa		6.08	□□□□□ -1.44
UBS1	YBR165W	RPN7	Q06103	429 aa	Known RBP	6.08	□□□□□ -1.44
UBS1	YBR165W	IRC13	Q08630	104 aa		6.08	□□□□□ -1.44
UBS1	YBR165W	RAD18	P10862	487 aa		6.07	□□□□□ -1.44
UBS1	YBR165W	YHR112C	P38716	378 aa		6.07	□□□□□ -1.44
UBS1	YBR165W	BCD1	P38772	366 aa		6.07	□□□□□ -1.44
UBS1	YBR165W	UBC11	P52492	156 aa		6.07	□□□□□ -1.44
UBS1	YBR165W	RIA1	P53893	1110 aa		6.07	□□□□□ -1.44
UBS1	YBR165W	YLR001C	Q07895	862 aa		6.07	□□□□□ -1.44
UBS1	YBR165W	FMP52	P40008	231 aa		6.06	□□□□□ -1.44
UBS1	YBR165W	GID8	P40208	455 aa		6.06	□□□□□ -1.44
UBS1	YBR165W	ATG33	Q06485	197 aa		6.06	□□□□□ -1.44
UBS1	YBR165W	MCM21	Q06675	368 aa		6.06	□□□□□ -1.44
UBS1	YBR165W	PCM1	P38628	557 aa	Known RBP	6.05	□□□□□ -1.44
UBS1	YBR165W	PCL10	P53124	433 aa		6.05	□□□□□ -1.44
UBS1	YBR165W	HBT1	Q07653	1046 aa	Known RBP	6.05	□□□□□ -1.44
UBS1	YBR165W	SGO1	Q08490	590 aa		6.05	□□□□□ -1.44
UBS1	YBR165W	SFL1	P20134	766 aa		6.04	□□□□□ -1.44
UBS1	YBR165W	PPG1	P32838	368 aa		6.04	□□□□□ -1.44
UBS1	YBR165W	TRZ1	P36159	838 aa	Predicted RBP	6.04	□□□□□ -1.44
UBS1	YBR165W	NMD2	P38798	1089 aa	Known RBP	6.04	□□□□□ -1.44
UBS1	YBR165W	SDS3	P40505	327 aa		6.04	□□□□□ -1.44
UBS1	YBR165W	HMO1	Q03973	246 aa	Known RBP	6.04	□□□□□ -1.44
UBS1	YBR165W	SIR3	P06701	978 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	HMG1	P12683	1054 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	CCR4	P31384	837 aa	Known RBP	6.03	□□□□□ -1.44
UBS1	YBR165W	HIR1	P32479	840 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	MTH1	P35198	433 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	CCT3	P39077	534 aa	Known RBP	6.03	□□□□□ -1.44
UBS1	YBR165W	QRI1	P43123	477 aa	Known RBP	6.03	□□□□□ -1.44
UBS1	YBR165W	UBC9	P50623	157 aa	Predicted RBP	6.03	□□□□□ -1.44
UBS1	YBR165W	YNL193W	P53870	558 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	ARP4	P80428	489 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	TFB2	Q02939	513 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	CTK1	Q03957	528 aa	Known RBP	6.03	□□□□□ -1.44
UBS1	YBR165W	IRC10	Q08118	586 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	GIN4	Q12263	1142 aa		6.03	□□□□□ -1.44
UBS1	YBR165W	HIS7	P33734	552 aa	Known RBP	6.02	□□□□□ -1.45
UBS1	YBR165W	APT2	P36973	181 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	LYS9	P38999	446 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	DOT6	P40059	670 aa	Known RBP	6.02	□□□□□ -1.45
UBS1	YBR165W	TEL2	P53038	688 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	AIM14	P53109	570 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	MTL1	P53214	551 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	GND2	P53319	492 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	REC102	Q02721	264 aa		6.02	□□□□□ -1.45
UBS1	YBR165W	NOP14	Q99207	810 aa	Known RBP	6.02	□□□□□ -1.45
UBS1	YBR165W	HRP1	Q99383	534 aa	Known RBP	6.02	□□□□□ -1.45
UBS1	YBR165W	YAP1802	P53309	568 aa		6.01	□□□□□ -1.45
UBS1	YBR165W	ERG6	P25087	383 aa	Known RBP	6	□□□□□ -1.45
UBS1	YBR165W	FMO1	P38866	432 aa		6	□□□□□ -1.45
UBS1	YBR165W	REV7	P38927	245 aa		6	□□□□□ -1.45
UBS1	YBR165W	STU2	P46675	888 aa		6	□□□□□ -1.45
UBS1	YBR165W	RPL8A	P17076	256 aa	Known RBP	5.99	□□□□□ -1.45
UBS1	YBR165W	MNN4	P36044	1178 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	SPC42	P36094	363 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	SSZ1	P38788	538 aa	Known RBP	5.99	□□□□□ -1.45
UBS1	YBR165W	PCL5	P38794	229 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	NUP60	P39705	539 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	MGS1	P40151	587 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	MET13	P53128	600 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	BRE5	P53741	515 aa	Known RBP	5.99	□□□□□ -1.45
UBS1	YBR165W	SSL2	Q00578	843 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	LEE1	Q02799	301 aa	Known RBP	5.99	□□□□□ -1.45
UBS1	YBR165W	YKL033W-A	Q86ZR7	236 aa		5.99	□□□□□ -1.45
UBS1	YBR165W	MNN1	P39106	762 aa		5.98	□□□□□ -1.45
UBS1	YBR165W	SET2	P46995	733 aa	Known RBP	5.98	□□□□□ -1.45
UBS1	YBR165W	YJR039W	P47107	1121 aa		5.98	□□□□□ -1.45
UBS1	YBR165W	GIS1	Q03833	894 aa		5.98	□□□□□ -1.45
UBS1	YBR165W	UTP14	Q04500	899 aa	Known RBP	5.98	□□□□□ -1.45
UBS1	YBR165W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.98	□□□□□ -1.45	not detected
UBS1	YBR165W	RNR1	P21524	888 aa	Known RBP	5.97	□□□□□ -1.45
UBS1	YBR165W	GET2	P40056	285 aa		5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms