RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SCAND2PQ9GZW5 306 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 RFX5P48382 616 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 MCMDC2Q4G0Z9 681 aa16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 MYRIPQ8NFW9 859 aa16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 MED23Q9ULK4 1368 aa16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 ATP5JP18859 108 aa16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 SPDYE4A6NLX3 237 aa16.55■□□□□ 0.24
CACNA1A-228ENST00000636610 CBX1P83916 185 aa16.55■□□□□ 0.24
CACNA1A-228ENST00000636610 ZNF710Q8N1W2 664 aa16.55■□□□□ 0.24
CACNA1A-228ENST00000636610 KIAA1524Q8TCG1 905 aa16.55■□□□□ 0.24
CACNA1A-228ENST00000636610 TERF1P54274 439 aa16.55■□□□□ 0.24
CACNA1A-228ENST00000636610 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 RIOK3O14730 519 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 IFNL2Q8IZJ0 200 aa16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 UTYO14607 1347 aa16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 C11orf57Q6ZUT1 292 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
CACNA1A-228ENST00000636610 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 ME1P48163 572 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 ISM2Q6H9L7 571 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 KIF3AQ9Y496 699 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 USP28Q96RU2 1077 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
CACNA1A-228ENST00000636610 NBPF26B4DH59 902 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 RESTQ13127 1097 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 CCDC144BQ3MJ40 725 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 GORABQ5T7V8 394 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 NBPF14Q5TI25 921 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 NBPF10Q6P3W6 841 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 NBPF15Q8N660 670 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 HMG20BQ9P0W2 317 aa16.52■□□□□ 0.24
CACNA1A-228ENST00000636610 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-228ENST00000636610 GOLPH3LQ9H4A5 285 aa16.52■□□□□ 0.23
CACNA1A-228ENST00000636610 CLIP2Q9UDT6 1046 aa16.52■□□□□ 0.23
CACNA1A-228ENST00000636610 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 IGSF3O75054 1194 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 IFIT1P09914 478 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 BIN1O00499 593 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 HAUS7Q99871 368 aa16.51■□□□□ 0.23
CACNA1A-228ENST00000636610 ADGRL3Q9HAR2 1447 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 KRT32Q14532 448 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 TRMT1Q9NXH9 659 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 A0A1B0GVL5 298 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 GOLGA6L19H0YKK7 550 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 RXRAP19793 462 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 ADORA1P30542 326 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 STK11IPQ8N1F8 1099 aa16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-228ENST00000636610 ZNF75DP51815 510 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 BECN2A8MW95 431 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 E7EWF7 191 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 V9GYY5 206 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 MEGF6O75095 1541 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
CACNA1A-228ENST00000636610 M0R2C6 588 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 USPL1Q5W0Q7 1092 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 SPTLC3Q9NUV7 552 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 DENND2AQ9ULE3 1009 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 ELP1O95163 1332 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 NPHP1O15259 732 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 ATF3P18847 181 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 FOXO4P98177 505 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 TPD52L1Q16890 204 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
CACNA1A-228ENST00000636610 HMGN5P82970 282 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 ZSCAN25Q6NSZ9 544 aa16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 OSBP2Q969R2 916 aa16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 PRIMPOLQ96LW4 560 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms