RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ALKQ9UM73 1620 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 POLR3DP05423 398 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-216ENST00000620854 MYL6BP14649 208 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 POLA2Q14181 598 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 BEND3Q5T5X7 828 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 IFNL2Q8IZJ0 200 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 EPC1Q9H2F5 836 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 ATP7BP35670 1465 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 PIK3C2BO00750 1634 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
NEDD9-216ENST00000620854 TDRD7Q8NHU6 1098 aaKnown RBP8.12□□□□□ -1.11
NEDD9-216ENST00000620854 MAP4K1Q92918 833 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 LRRC59Q96AG4 307 aaKnown RBP8.12□□□□□ -1.11
NEDD9-216ENST00000620854 AGLP35573 1532 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 MYO5BQ9ULV0 1848 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 RPS6KB1P23443 525 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 RBM6P78332 1123 aaKnown RBP8.12□□□□□ -1.11
NEDD9-216ENST00000620854 GOLGA8FQ08AF8 430 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 GOLGA8DPQ0D2H9 430 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 WASHC4Q2M389 1173 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 TMC6Q7Z403 805 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 FSIP1Q8NA03 581 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 SLAIN2Q9P270 581 aa8.12□□□□□ -1.11
NEDD9-216ENST00000620854 EXOC5O00471 708 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 AKAP17AQ02040 695 aaKnown RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 KIF6Q6ZMV9 814 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 ZNF397Q8NF99 534 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 TMEM94Q12767 1356 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 AOX1Q06278 1338 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 HOXC9P31274 260 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 SNW1Q13573 536 aaKnown RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 IP6K1Q92551 441 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 USP28Q96RU2 1077 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 KAT6BQ8WYB5 2073 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 SASH1O94885 1247 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 SLU7O95391 586 aaKnown RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 APOBRQ0VD83 1088 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 ARHGAP29Q52LW3 1261 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 GOLPH3LQ9H4A5 285 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 BICC1Q9H694 974 aaKnown RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 ZCCHC17Q9NP64 241 aaKnown RBP8.11□□□□□ -1.11
NEDD9-216ENST00000620854 TMEM51Q9NW97 253 aa8.11□□□□□ -1.11
NEDD9-216ENST00000620854 IQCB1Q15051 598 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 SYNE3Q6ZMZ3 975 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 NFXL1Q6ZNB6 911 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 MNS1Q8NEH6 495 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 NEK1Q96PY6 1258 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 TM6SF1Q9BZW5 370 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 IFNKQ9P0W0 207 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 DNAI1Q9UI46 699 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 MORC2Q9Y6X9 1032 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-216ENST00000620854 TRDNQ13061 729 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 TRIM29Q14134 588 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 TTLL5Q6EMB2 1281 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
NEDD9-216ENST00000620854 GJB4Q9NTQ9 266 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 TTC41PQ6P2S7 1318 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 URI1O94763 535 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-216ENST00000620854 ANKRD1Q15327 319 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 SUCLG2Q96I99 432 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
NEDD9-216ENST00000620854 GABPB1Q06547 395 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 STX1AQ16623 288 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 PDILTQ8N807 584 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 ELP1O95163 1332 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 KIF20BQ96Q89 1820 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 SBNO1A3KN83 1393 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 A0A0G2JLW4 131 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 MARCH6O60337 910 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 SEC31AO94979 1220 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 SCRN1Q12765 414 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 RALYLQ86SE5 291 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 CEP57L1Q8IYX8 460 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 XPO4Q9C0E2 1151 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 ZNF446Q9NWS9 450 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 CDC42BPGQ6DT37 1551 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 CCDC66A2RUB6 948 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 G3V3G9 751 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 GYS2P54840 703 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 EIF4A1P60842 406 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 TSR1Q2NL82 804 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 DCAF8Q5TAQ9 597 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 NEK11Q8NG66 645 aa8.09□□□□□ -1.11
NEDD9-216ENST00000620854 DDX17Q92841 729 aaKnown RBP8.09□□□□□ -1.11
NEDD9-216ENST00000620854 STARD3NLO95772 234 aa8.08□□□□□ -1.12
NEDD9-216ENST00000620854 SFPQP23246 707 aaKnown RBP eCLIP8.08□□□□□ -1.124e-6■■□□□ 13.1
NEDD9-216ENST00000620854 CCZ1BP86790 482 aa8.08□□□□□ -1.12
NEDD9-216ENST00000620854 CCZ1P86791 482 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-216ENST00000620854 DPCR1Q3MIW9 517 aa8.08□□□□□ -1.12
NEDD9-216ENST00000620854 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-216ENST00000620854 TIGD1Q96MW7 591 aa8.08□□□□□ -1.12
NEDD9-216ENST00000620854 RESTQ13127 1097 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms