RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 FBXO22Q8NEZ5 403 aa14.01□□□□□ -0.17
TP53-220ENST00000610623 TM6SF1Q9BZW5 370 aa14.01□□□□□ -0.17
TP53-220ENST00000610623 GOLGA6L19H0YKK7 550 aa14□□□□□ -0.17
TP53-220ENST00000610623 LARGE1O95461 756 aa14□□□□□ -0.17
TP53-220ENST00000610623 ATF3P18847 181 aa14□□□□□ -0.17
TP53-220ENST00000610623 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
TP53-220ENST00000610623 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
TP53-220ENST00000610623 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
TP53-220ENST00000610623 CASTP20810 708 aaKnown RBP13.99□□□□□ -0.17
TP53-220ENST00000610623 RBM26Q5T8P6 1007 aaKnown RBP13.99□□□□□ -0.17
TP53-220ENST00000610623 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
TP53-220ENST00000610623 SLC4A10Q6U841 1118 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 DNAJC25Q9H1X3 360 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 PDRG1Q9NUG6 133 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 ATP8B1O43520 1251 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 PNMA6AP0CW24 399 aaPredicted RBP13.99□□□□□ -0.17
TP53-220ENST00000610623 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
TP53-220ENST00000610623 ARGLU1Q9NWB6 273 aaPredicted RBP13.99□□□□□ -0.17
TP53-220ENST00000610623 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 TMEM94Q12767 1356 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 ABCC6O95255 1503 aa13.99□□□□□ -0.17
TP53-220ENST00000610623 PSEN1P49768 467 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 CLCN6P51797 869 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 CCZ1BP86790 482 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 CCZ1P86791 482 aaPredicted RBP13.98□□□□□ -0.17
TP53-220ENST00000610623 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 CCDC69A6NI79 296 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 GSDMDP57764 484 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 IQCB1Q15051 598 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 SPATA32Q96LK8 384 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 ZSWIM6Q9HCJ5 1215 aa13.98□□□□□ -0.17
TP53-220ENST00000610623 PNMA6EA0A0J9YXQ4 647 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 ZRANB2O95218 330 aaKnown RBP eCLIP13.97□□□□□ -0.17
TP53-220ENST00000610623 HOXB7P09629 217 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 ERCC6LQ2NKX8 1250 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 CCDC93Q567U6 631 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 CNTROBQ8N137 903 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 GPS2Q13227 327 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 RASSF4Q9H2L5 321 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 YY1AP1Q9H869 796 aa13.97□□□□□ -0.17
TP53-220ENST00000610623 ADAMTS7Q9UKP4 1686 aa13.96□□□□□ -0.17
TP53-220ENST00000610623 TNNT3P45378 269 aaPredicted RBP13.96□□□□□ -0.17
TP53-220ENST00000610623 SNW1Q13573 536 aaKnown RBP13.96□□□□□ -0.17
TP53-220ENST00000610623 TMCO3Q6UWJ1 677 aa13.96□□□□□ -0.17
TP53-220ENST00000610623 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
TP53-220ENST00000610623 LEO1Q8WVC0 666 aaPredicted RBP13.96□□□□□ -0.17
TP53-220ENST00000610623 KCNB2Q92953 911 aa13.96□□□□□ -0.17
TP53-220ENST00000610623 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.17
TP53-220ENST00000610623 F6X3S4 739 aa13.96□□□□□ -0.18
TP53-220ENST00000610623 FLIIQ13045 1269 aa13.96□□□□□ -0.18
TP53-220ENST00000610623 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.18
TP53-220ENST00000610623 ARID5BQ14865 1188 aa13.96□□□□□ -0.18
TP53-220ENST00000610623 ME3Q16798 604 aa13.96□□□□□ -0.18
TP53-220ENST00000610623 ZNF530Q6P9A1 599 aaPredicted RBP13.96□□□□□ -0.18
TP53-220ENST00000610623 G2E3Q7L622 706 aa13.96□□□□□ -0.18
TP53-220ENST00000610623 PLEKHG2Q9H7P9 1386 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
TP53-220ENST00000610623 CTAGE5O15320 804 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 NR1I2O75469 434 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 KCNJ6P48051 423 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 ST3GAL1Q11201 340 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 CTR9Q6PD62 1173 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
TP53-220ENST00000610623 TRERF1Q96PN7 1200 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 PSDA5PKW4 1024 aaPredicted RBP13.95□□□□□ -0.18
TP53-220ENST00000610623 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
TP53-220ENST00000610623 RUFY2Q8WXA3 655 aa13.95□□□□□ -0.18
TP53-220ENST00000610623 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
TP53-220ENST00000610623 COL18A1P39060 1754 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 NPHP1O15259 732 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 TPM1P09493 284 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 MLLT3P42568 568 aaPredicted RBP13.94□□□□□ -0.18
TP53-220ENST00000610623 STX1AQ16623 288 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 ARHGAP29Q52LW3 1261 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 UBXN6Q9BZV1 441 aa13.94□□□□□ -0.18
TP53-220ENST00000610623 OSBPL5Q9H0X9 879 aaPredicted RBP13.94□□□□□ -0.18
TP53-220ENST00000610623 CWC15Q9P013 229 aaKnown RBP13.94□□□□□ -0.18
TP53-220ENST00000610623 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.185e-7■■□□□ 14.2
TP53-220ENST00000610623 TNS3Q68CZ2 1445 aa13.93□□□□□ -0.18
TP53-220ENST00000610623 CPA1P15085 419 aa13.93□□□□□ -0.18
TP53-220ENST00000610623 TEFQ10587 303 aa13.93□□□□□ -0.18
TP53-220ENST00000610623 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
TP53-220ENST00000610623 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
TP53-220ENST00000610623 XIRP1Q702N8 1843 aaKnown RBP13.93□□□□□ -0.18
TP53-220ENST00000610623 BECN2A8MW95 431 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms