RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 RIMBP3BA6NNM3 1639 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 RIMBP3Q9UFD9 1639 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 ADH6P28332 368 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 PIK3R5Q8WYR1 880 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 COL26A1Q96A83 441 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 URB2Q14146 1524 aaKnown RBP5.18□□□□□ -1.58
ZNF540-207ENST00000589285 RBAK-RBAKDNI3L0D1 243 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 MAPK8P45983 427 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 ADAMTS8Q9UP79 889 aa5.18□□□□□ -1.58
ZNF540-207ENST00000589285 OIP5O43482 229 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 HGSNATQ68CP4 663 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 CHSY3Q70JA7 882 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 JPH1Q9HDC5 661 aaPredicted RBP5.17□□□□□ -1.58
ZNF540-207ENST00000589285 SOGA1O94964 1423 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 WRNQ14191 1432 aaPredicted RBP eCLIP5.17□□□□□ -1.58
ZNF540-207ENST00000589285 RUSC2Q8N2Y8 1516 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 KCNQ4P56696 695 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 ABI2Q9NYB9 513 aaPredicted RBP5.17□□□□□ -1.58
ZNF540-207ENST00000589285 BRPF3Q9ULD4 1205 aa5.17□□□□□ -1.58
ZNF540-207ENST00000589285 EPS8L3Q8TE67 593 aaKnown RBP5.17□□□□□ -1.58
ZNF540-207ENST00000589285 SMG9Q9H0W8 520 aaKnown RBP5.17□□□□□ -1.58
ZNF540-207ENST00000589285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.17□□□□□ -1.58
ZNF540-207ENST00000589285 TDRD9Q8NDG6 1382 aaKnown RBP5.16□□□□□ -1.58
ZNF540-207ENST00000589285 EIF4G3O43432 1585 aaKnown RBP5.16□□□□□ -1.58
ZNF540-207ENST00000589285 FAM13AO94988 1023 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 PEAR1Q5VY43 1037 aaPredicted RBP5.16□□□□□ -1.58
ZNF540-207ENST00000589285 ABTB2Q8N961 1025 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 RASSF4Q9H2L5 321 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 NPHS2Q9NP85 383 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 SLC6A14Q9UN76 642 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 GNEQ9Y223 722 aaKnown RBP5.16□□□□□ -1.58
ZNF540-207ENST00000589285 ARHGEF15O94989 841 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 CES1P23141 567 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 MZF1P28698 734 aaPredicted RBP5.16□□□□□ -1.58
ZNF540-207ENST00000589285 GRIK4Q16099 956 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 SHISA2Q6UWI4 295 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 NCAPG2Q86XI2 1143 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 TRIM11Q96F44 468 aa5.16□□□□□ -1.58
ZNF540-207ENST00000589285 SH2B1Q9NRF2 756 aaPredicted RBP5.16□□□□□ -1.58
ZNF540-207ENST00000589285 BCRP11274 1271 aa5.15□□□□□ -1.58
ZNF540-207ENST00000589285 COL8A1P27658 744 aa5.15□□□□□ -1.58
ZNF540-207ENST00000589285 ZNF157P51786 506 aaPredicted RBP5.15□□□□□ -1.58
ZNF540-207ENST00000589285 SF3B2Q13435 895 aaKnown RBP5.15□□□□□ -1.58
ZNF540-207ENST00000589285 BTBD6Q96KE9 485 aa5.15□□□□□ -1.58
ZNF540-207ENST00000589285 LPIN3Q9BQK8 851 aa5.15□□□□□ -1.58
ZNF540-207ENST00000589285 MAGI1Q96QZ7 1491 aaPredicted RBP5.15□□□□□ -1.58
ZNF540-207ENST00000589285 ABCA5Q8WWZ7 1642 aa5.15□□□□□ -1.58
ZNF540-207ENST00000589285 FBXO24O75426 580 aa5.15□□□□□ -1.59
ZNF540-207ENST00000589285 MARSP56192 900 aaKnown RBP5.15□□□□□ -1.59
ZNF540-207ENST00000589285 LBRQ14739 615 aaKnown RBP5.15□□□□□ -1.59
ZNF540-207ENST00000589285 GJD3Q8N144 294 aa5.15□□□□□ -1.59
ZNF540-207ENST00000589285 RAD54L2Q9Y4B4 1467 aa5.15□□□□□ -1.59
ZNF540-207ENST00000589285 ELOA3CA0A087WX78 387 aaPredicted RBP5.14□□□□□ -1.59
ZNF540-207ENST00000589285 ELOA3DA6NLF2 546 aaPredicted RBP5.14□□□□□ -1.59
ZNF540-207ENST00000589285 EPB42P16452 691 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 NPR3P17342 541 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 COL9A3Q14050 684 aaPredicted RBP5.14□□□□□ -1.59
ZNF540-207ENST00000589285 ELOA3BQ3SY89 546 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 SLCO4C1Q6ZQN7 724 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 ELOA3Q8NG57 546 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 FOXD4L4Q8WXT5 416 aaPredicted RBP5.14□□□□□ -1.59
ZNF540-207ENST00000589285 MDFIQ99750 246 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 BIVM-ERCC5R4GMW8 1640 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 ARAFP10398 606 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 NLRP13Q86W25 1043 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 GMCL1Q96IK5 515 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 FAM182BQ5T319 152 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 CEP135Q66GS9 1140 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 PLD4Q96BZ4 506 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 ZKSCAN3Q9BRR0 538 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 STK17AQ9UEE5 414 aa5.14□□□□□ -1.59
ZNF540-207ENST00000589285 TOPBP1Q92547 1522 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 ANKRD33BA6NCL7 494 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 F6X3S4 739 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 DGKGP49619 791 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 AFF1P51825 1210 aaKnown RBP5.13□□□□□ -1.59
ZNF540-207ENST00000589285 DMRTC2Q8IXT2 367 aaPredicted RBP5.13□□□□□ -1.59
ZNF540-207ENST00000589285 ASAP3Q8TDY4 903 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 CARD10Q9BWT7 1032 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 TLR7Q9NYK1 1049 aaKnown RBP5.13□□□□□ -1.59
ZNF540-207ENST00000589285 CHD1O14646 1710 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 LOC102724428A0A0B4J2F2 783 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 EIF1AYO14602 144 aaKnown RBP5.13□□□□□ -1.59
ZNF540-207ENST00000589285 PHACTR2O75167 634 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 SIN3BO75182 1162 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 SIK1P57059 783 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 SND1Q7KZF4 910 aaKnown RBP eCLIP5.13□□□□□ -1.59
ZNF540-207ENST00000589285 GOLGA6L1Q8N7Z2 621 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 POP1Q99575 1024 aaKnown RBP5.13□□□□□ -1.59
ZNF540-207ENST00000589285 SALL4Q9UJQ4 1053 aa5.13□□□□□ -1.59
ZNF540-207ENST00000589285 PSAPP07602 524 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 MAP3K10Q02779 954 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 SPRED3Q2MJR0 410 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 B4GALNT3Q6L9W6 998 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 MICALL1Q8N3F8 863 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 SYNJ1O43426 1573 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 PBRM1Q86U86 1689 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 DDX3YO15523 660 aaKnown RBP5.12□□□□□ -1.59
ZNF540-207ENST00000589285 NDUFB5O43674 189 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 P4HBP07237 508 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms