RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 SOX18P35713 384 aa9.99□□□□□ -0.81
SMCHD1-207ENST00000581711 TXKP42681 527 aa9.99□□□□□ -0.81
SMCHD1-207ENST00000581711 FMNL2Q96PY5 1086 aa9.99□□□□□ -0.81
SMCHD1-207ENST00000581711 RBSNQ9H1K0 784 aa9.99□□□□□ -0.81
SMCHD1-207ENST00000581711 LRFN2Q9ULH4 789 aa9.99□□□□□ -0.81
SMCHD1-207ENST00000581711 TGFB1P01137 390 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 IGLV1-40P01703 118 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 ARXQ96QS3 562 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 TRIM33Q9UPN9 1127 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 KCNMB2Q9Y691 235 aa9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 OAS3Q9Y6K5 1087 aaKnown RBP9.98□□□□□ -0.81
SMCHD1-207ENST00000581711 COBLO75128 1261 aa9.97□□□□□ -0.81
SMCHD1-207ENST00000581711 UBL7Q96S82 380 aaPredicted RBP9.97□□□□□ -0.81
SMCHD1-207ENST00000581711 STOML1Q9UBI4 398 aa9.97□□□□□ -0.81
SMCHD1-207ENST00000581711 FNBP4Q8N3X1 1017 aaPredicted RBP9.96□□□□□ -0.82
SMCHD1-207ENST00000581711 GP2P55259 537 aaKnown RBP9.95□□□□□ -0.82
SMCHD1-207ENST00000581711 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
SMCHD1-207ENST00000581711 VRTNQ9H8Y1 702 aa9.95□□□□□ -0.82
SMCHD1-207ENST00000581711 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
SMCHD1-207ENST00000581711 DHX15O43143 795 aaKnown RBP9.94□□□□□ -0.82
SMCHD1-207ENST00000581711 PROSER2Q86WR7 435 aaPredicted RBP9.94□□□□□ -0.82
SMCHD1-207ENST00000581711 CACTIN-AS1Q8N1I8 211 aa9.94□□□□□ -0.82
SMCHD1-207ENST00000581711 GALNT11Q8NCW6 608 aa9.94□□□□□ -0.82
SMCHD1-207ENST00000581711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.94□□□□□ -0.822e-11■■■■■ 55.9
SMCHD1-207ENST00000581711 WISP1O95388 367 aa9.93□□□□□ -0.82
SMCHD1-207ENST00000581711 TAL1P17542 331 aaPredicted RBP9.93□□□□□ -0.82
SMCHD1-207ENST00000581711 ZDHHC13Q8IUH4 622 aa9.93□□□□□ -0.82
SMCHD1-207ENST00000581711 ARMC10Q8N2F6 343 aa9.93□□□□□ -0.82
SMCHD1-207ENST00000581711 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
SMCHD1-207ENST00000581711 YBX3P16989 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMCHD1-207ENST00000581711 LMOD1P29536 600 aaPredicted RBP9.91□□□□□ -0.82
SMCHD1-207ENST00000581711 COX20Q5RI15 118 aa9.91□□□□□ -0.82
SMCHD1-207ENST00000581711 NLRP13Q86W25 1043 aa9.91□□□□□ -0.82
SMCHD1-207ENST00000581711 CALR3Q96L12 384 aaKnown RBP9.91□□□□□ -0.82
SMCHD1-207ENST00000581711 CEP41Q9BYV8 373 aa9.91□□□□□ -0.82
SMCHD1-207ENST00000581711 LINC01387J3KSC0 135 aa9.9□□□□□ -0.82
SMCHD1-207ENST00000581711 NFIAQ12857 509 aa9.9□□□□□ -0.82
SMCHD1-207ENST00000581711 TRIP4Q15650 581 aaPredicted RBP9.9□□□□□ -0.82
SMCHD1-207ENST00000581711 ACAD11Q709F0 780 aa9.9□□□□□ -0.82
SMCHD1-207ENST00000581711 ADAMTS4O75173 837 aa9.89□□□□□ -0.83
SMCHD1-207ENST00000581711 CD68P34810 354 aaPredicted RBP9.89□□□□□ -0.83
SMCHD1-207ENST00000581711 UVSSAQ2YD98 709 aa9.89□□□□□ -0.83
SMCHD1-207ENST00000581711 TXNDC11Q6PKC3 985 aa9.89□□□□□ -0.83
SMCHD1-207ENST00000581711 UTP4Q969X6 686 aaKnown RBP9.89□□□□□ -0.83
SMCHD1-207ENST00000581711 KCNK4Q9NYG8 393 aa9.89□□□□□ -0.83
SMCHD1-207ENST00000581711 SPINK2P20155 84 aa9.88□□□□□ -0.83
SMCHD1-207ENST00000581711 ATP11AP98196 1134 aa9.88□□□□□ -0.83
SMCHD1-207ENST00000581711 FKBP5Q13451 457 aaPredicted RBP9.88□□□□□ -0.83
SMCHD1-207ENST00000581711 ETFBKMTQ8IXQ9 262 aa9.88□□□□□ -0.83
SMCHD1-207ENST00000581711 C7orf69Q9H7B7 122 aa9.88□□□□□ -0.83
SMCHD1-207ENST00000581711 TM4SF5O14894 197 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 GRIK1P39086 918 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 COL13A1Q5TAT6 717 aaPredicted RBP9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 INTS5Q6P9B9 1019 aaKnown RBP9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 TRIM42Q8IWZ5 723 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 OR13H1Q8NG92 308 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 FAM200AQ8TCP9 573 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 FAM46AQ96IP4 442 aaKnown RBP9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 LACRTQ9GZZ8 138 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 RNF114Q9Y508 228 aa9.87□□□□□ -0.83
SMCHD1-207ENST00000581711 HMX2A2RU54 273 aa9.86□□□□□ -0.83
SMCHD1-207ENST00000581711 RNF43Q68DV7 783 aa9.86□□□□□ -0.83
SMCHD1-207ENST00000581711 DBNDD2Q9BQY9 259 aa9.86□□□□□ -0.83
SMCHD1-207ENST00000581711 CARD10Q9BWT7 1032 aa9.86□□□□□ -0.83
SMCHD1-207ENST00000581711 CEP135Q66GS9 1140 aa9.85□□□□□ -0.83
SMCHD1-207ENST00000581711 KIAA1211Q6ZU35 1233 aa9.85□□□□□ -0.83
SMCHD1-207ENST00000581711 MYRFLQ96LU7 910 aa9.85□□□□□ -0.83
SMCHD1-207ENST00000581711 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 UBAP1LF5GYI3 381 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 SMNDC1O75940 238 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 CDC27P30260 824 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 CDC25BP30305 580 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 HYAL2Q12891 473 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 DTX1Q86Y01 620 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 SPACA7Q96KW9 195 aa9.84□□□□□ -0.83
SMCHD1-207ENST00000581711 DUOXA2Q1HG44 320 aa9.83□□□□□ -0.84
SMCHD1-207ENST00000581711 ADAMTSL4Q6UY14 1074 aa9.83□□□□□ -0.84
SMCHD1-207ENST00000581711 SAP130Q9H0E3 1048 aa9.83□□□□□ -0.84
SMCHD1-207ENST00000581711 FSCN2O14926 492 aa9.82□□□□□ -0.84
SMCHD1-207ENST00000581711 BRD2P25440 801 aaKnown RBP9.82□□□□□ -0.84
SMCHD1-207ENST00000581711 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
SMCHD1-207ENST00000581711 KLHL23Q8NBE8 558 aa9.82□□□□□ -0.84
SMCHD1-207ENST00000581711 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
SMCHD1-207ENST00000581711 A6NJR5 290 aa9.81□□□□□ -0.84
SMCHD1-207ENST00000581711 C16orf46Q6P387 395 aa9.81□□□□□ -0.84
SMCHD1-207ENST00000581711 UBASH3BQ8TF42 649 aa9.81□□□□□ -0.84
SMCHD1-207ENST00000581711 FOXD4L4Q8WXT5 416 aaPredicted RBP9.81□□□□□ -0.84
SMCHD1-207ENST00000581711 PIK3R5Q8WYR1 880 aa9.81□□□□□ -0.84
SMCHD1-207ENST00000581711 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
SMCHD1-207ENST00000581711 DDX3YO15523 660 aaKnown RBP9.8□□□□□ -0.84
SMCHD1-207ENST00000581711 ADAM11O75078 769 aa9.8□□□□□ -0.84
SMCHD1-207ENST00000581711 EPHA1P21709 976 aa9.8□□□□□ -0.84
SMCHD1-207ENST00000581711 SCNN1AP37088 669 aa9.8□□□□□ -0.84
SMCHD1-207ENST00000581711 FAM117BQ6P1L5 589 aa9.8□□□□□ -0.84
SMCHD1-207ENST00000581711 FAM20CQ8IXL6 584 aa9.8□□□□□ -0.84
SMCHD1-207ENST00000581711 ARID1BQ8NFD5 2236 aaPredicted RBP9.79□□□□□ -0.84
SMCHD1-207ENST00000581711 WNT11O96014 354 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms