RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 RIOK3O14730 519 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 KIF5CO60282 957 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 UBTFL1P0CB47 393 aaPredicted RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 PIP4K2AP48426 406 aaPredicted RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 EVA1CP58658 441 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 CWC27Q6UX04 472 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 CCDC83Q8IWF9 413 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 TNS2Q63HR2 1409 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 PHLPP1O60346 1717 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 SBNO1A3KN83 1393 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 EIF2S2P20042 333 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 LTKP29376 864 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 KIF5AQ12840 1032 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 SKIDA1Q1XH10 827 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 TAF3Q5VWG9 929 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 FERMT3Q86UX7 667 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 MYRIPQ8NFW9 859 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 CPLX3Q8WVH0 158 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 PRIMPOLQ96LW4 560 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 C4AP0C0L4 1744 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 C4BP0C0L5 1744 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 NOL3O60936 208 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 GNAI3P08754 354 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 SREK1Q8WXA9 508 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 SMARCE1Q969G3 411 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 LTV1Q96GA3 475 aaPredicted RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 LRRFIP2Q9Y608 721 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 WASLO00401 505 aaPredicted RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 FOXO3O43524 673 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 IGSF3O75054 1194 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 CPA1P15085 419 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 CASTP20810 708 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 CHMLP26374 656 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 SMC1AQ14683 1233 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 UVSSAQ2YD98 709 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 JAKMIP3Q5VZ66 844 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 PSMD1Q99460 953 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 OSBPL3Q9H4L5 887 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 SPG7Q9UQ90 795 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 ZSCAN22P10073 491 aaPredicted RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 TRDNQ13061 729 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 PRPF40BQ6NWY9 871 aaKnown RBP4.93□□□□□ -1.62
RTTN-206ENST00000581161 NFXL1Q6ZNB6 911 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 PDRG1Q9NUG6 133 aa4.93□□□□□ -1.62
RTTN-206ENST00000581161 STX6O43752 255 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 TMCO3Q6UWJ1 677 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 TAX1BP1Q86VP1 789 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 ZSCAN31Q96LW9 406 aaPredicted RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 PTPRCP08575 1304 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 CCDC192P0DO97 292 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 GTF2F1P35269 517 aaKnown RBP eCLIP4.92□□□□□ -1.62
RTTN-206ENST00000581161 FOSBP53539 338 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 CCDC181Q5TID7 509 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 NUCKS1Q9H1E3 243 aaKnown RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 COL5A3P25940 1745 aaPredicted RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 GJB2P29033 226 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 AMPHP49418 695 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 CKAP2LQ8IYA6 745 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 NUDT16Q96DE0 195 aaKnown RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 JAKMIP1Q96N16 626 aaKnown RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 BCL9LQ86UU0 1499 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 ZBTB22O15209 634 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 F13A1P00488 732 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 CNGA1P29973 690 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 OLFM4Q6UX06 510 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 LEKR1Q6ZMV7 388 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 ARFGEF2Q9Y6D5 1785 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 CPLX1O14810 134 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 EIF4A2Q14240 407 aaKnown RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 C16orf72Q14CZ0 275 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 BICD2Q8TD16 824 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 MKRN1Q9UHC7 482 aaKnown RBP4.92□□□□□ -1.62
RTTN-206ENST00000581161 COL24A1Q17RW2 1714 aa4.92□□□□□ -1.62
RTTN-206ENST00000581161 SLC3A2P08195 630 aaKnown RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 AK2P54819 239 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 CCDC117Q8IWD4 279 aaPredicted RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 FAM114A1Q8IWE2 563 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 CNTROBQ8N137 903 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 PSPC1Q8WXF1 523 aaKnown RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 C16orf45Q96MC5 204 aaPredicted RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 ANAPC4Q9UJX5 808 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 LAMA4Q16363 1823 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 DNM1Q05193 864 aaKnown RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 STK3Q13188 491 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 ATP2B3Q16720 1220 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 ATRIPQ8WXE1 791 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 ATP6V1E2Q96A05 226 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 CFAP36Q96G28 342 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 PPP1R1BQ9UD71 204 aaPredicted RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 EID1Q9Y6B2 187 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 NEDD4P46934 1319 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 CHL1O00533 1208 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 FLIIQ13045 1269 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 CCDC30Q5VVM6 783 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 UNC5CLQ8IV45 518 aa4.91□□□□□ -1.62
RTTN-206ENST00000581161 INTS4Q96HW7 963 aaKnown RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 NAP1L3Q99457 506 aaPredicted RBP4.91□□□□□ -1.62
RTTN-206ENST00000581161 FAM184BQ9ULE4 1060 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms