RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
USP43-202ENST00000570475 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
USP43-202ENST00000570475 RXRAP19793 462 aa17.96■□□□□ 0.47
USP43-202ENST00000570475 RALYLQ86SE5 291 aaKnown RBP17.96■□□□□ 0.47
USP43-202ENST00000570475 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
USP43-202ENST00000570475 SKILP12757 684 aa17.96■□□□□ 0.47
USP43-202ENST00000570475 ZNF75DP51815 510 aa17.96■□□□□ 0.47
USP43-202ENST00000570475 CCDC82Q8N4S0 544 aa17.96■□□□□ 0.47
USP43-202ENST00000570475 PGBD1Q96JS3 809 aa17.96■□□□□ 0.47
USP43-202ENST00000570475 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
USP43-202ENST00000570475 CREBRFQ8IUR6 639 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 KAZALD1Q96I82 304 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 TMX1Q9H3N1 280 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 HOXB7P09629 217 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 SCRN1Q12765 414 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 HMG20BQ9P0W2 317 aa17.95■□□□□ 0.46
USP43-202ENST00000570475 PTPN14Q15678 1187 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 PTPN21Q16825 1174 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 USP28Q96RU2 1077 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 CACTINQ8WUQ7 758 aaKnown RBP17.94■□□□□ 0.46
USP43-202ENST00000570475 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
USP43-202ENST00000570475 MARCKSP29966 332 aaPredicted RBP17.94■□□□□ 0.46
USP43-202ENST00000570475 ZSCAN25Q6NSZ9 544 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 C11orf57Q6ZUT1 292 aaPredicted RBP17.94■□□□□ 0.46
USP43-202ENST00000570475 CEP57L1Q8IYX8 460 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 RICTORQ6R327 1708 aa17.94■□□□□ 0.46
USP43-202ENST00000570475 NRDCO43847 1150 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 TTC39AQ5SRH9 613 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 CCAR2Q8N163 923 aaKnown RBP17.93■□□□□ 0.46
USP43-202ENST00000570475 ATP2B3Q16720 1220 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 PAG1Q9NWQ8 432 aa17.93■□□□□ 0.46
USP43-202ENST00000570475 EPB41L2O43491 1005 aaKnown RBP17.92■□□□□ 0.46
USP43-202ENST00000570475 ZNF710Q8N1W2 664 aa17.92■□□□□ 0.46
USP43-202ENST00000570475 METTL22Q9BUU2 404 aaPredicted RBP17.92■□□□□ 0.46
USP43-202ENST00000570475 CEP126Q9P2H0 1117 aa17.92■□□□□ 0.46
USP43-202ENST00000570475 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
USP43-202ENST00000570475 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
USP43-202ENST00000570475 STRN4Q9NRL3 753 aa17.92■□□□□ 0.46
USP43-202ENST00000570475 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 GOLGA8BA8MQT2 603 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 CCDC144BQ3MJ40 725 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 DHX32Q7L7V1 743 aaKnown RBP17.91■□□□□ 0.46
USP43-202ENST00000570475 TMC6Q7Z403 805 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 KAT6BQ8WYB5 2073 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 A1BGP04217 495 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 STX1AQ16623 288 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
USP43-202ENST00000570475 PDILTQ8N807 584 aa17.91■□□□□ 0.46
USP43-202ENST00000570475 LMOD1P29536 600 aaPredicted RBP17.9■□□□□ 0.46
USP43-202ENST00000570475 TRDNQ13061 729 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 FUCA2Q9BTY2 467 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 ORC3Q9UBD5 711 aaPredicted RBP17.9■□□□□ 0.46
USP43-202ENST00000570475 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
USP43-202ENST00000570475 TPM4P67936 248 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 PTPN12Q05209 780 aaKnown RBP17.9■□□□□ 0.46
USP43-202ENST00000570475 CCDC57Q2TAC2 916 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 LRRC24Q50LG9 513 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 NAT10Q9H0A0 1025 aaKnown RBP17.9■□□□□ 0.46
USP43-202ENST00000570475 ANO10Q9NW15 660 aa17.9■□□□□ 0.46
USP43-202ENST00000570475 GPTP24298 496 aa17.89■□□□□ 0.45
USP43-202ENST00000570475 MTX1Q13505 466 aa17.89■□□□□ 0.45
USP43-202ENST00000570475 ZSCAN16Q9H4T2 348 aaPredicted RBP17.89■□□□□ 0.45
USP43-202ENST00000570475 ITSN1Q15811 1721 aa17.89■□□□□ 0.45
USP43-202ENST00000570475 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
USP43-202ENST00000570475 IFNL2Q8IZJ0 200 aa17.89■□□□□ 0.45
USP43-202ENST00000570475 TECPR2O15040 1411 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 ATP5JP18859 108 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 SERPINC1P01008 464 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 ARHGEF25Q86VW2 580 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 PUS3Q9BZE2 481 aaKnown RBP17.88■□□□□ 0.45
USP43-202ENST00000570475 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 USP27XA6NNY8 438 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
USP43-202ENST00000570475 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
USP43-202ENST00000570475 ATF3P18847 181 aa17.87■□□□□ 0.45
USP43-202ENST00000570475 STOX1Q6ZVD7 989 aa17.87■□□□□ 0.45
USP43-202ENST00000570475 ERICH4A6NGS2 130 aa17.87■□□□□ 0.45
USP43-202ENST00000570475 MICU3Q86XE3 530 aa17.87■□□□□ 0.45
USP43-202ENST00000570475 IFNKQ9P0W0 207 aa17.87■□□□□ 0.45
USP43-202ENST00000570475 RESTQ13127 1097 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 PI16Q6UXB8 463 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 E7EWF7 191 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 IMMTQ16891 758 aaKnown RBP17.86■□□□□ 0.45
USP43-202ENST00000570475 GOLPH3LQ9H4A5 285 aa17.86■□□□□ 0.45
USP43-202ENST00000570475 SLC3A2P08195 630 aaKnown RBP17.85■□□□□ 0.45
USP43-202ENST00000570475 CDK11BP21127 795 aaKnown RBP17.85■□□□□ 0.45
USP43-202ENST00000570475 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms