RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
COMMD4-215ENST00000566843 H3BQV1 296 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 GSDMDP57764 484 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 SNW1Q13573 536 aaKnown RBP18.38■□□□□ 0.53
COMMD4-215ENST00000566843 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-215ENST00000566843 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
COMMD4-215ENST00000566843 ENGASEQ8NFI3 743 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 LLPHQ9BRT6 129 aaKnown RBP18.38■□□□□ 0.53
COMMD4-215ENST00000566843 OSBPL5Q9H0X9 879 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-215ENST00000566843 BOLA2Q9H3K6 86 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 TLR7Q9NYK1 1049 aaKnown RBP18.38■□□□□ 0.53
COMMD4-215ENST00000566843 ATL3Q6DD88 541 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 SUCLG2Q96I99 432 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 GOLPH3LQ9H4A5 285 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
COMMD4-215ENST00000566843 NUTM2GQ5VZR2 741 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 L2HGDHQ9H9P8 463 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 BECN2A8MW95 431 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 ATF3P18847 181 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 ELF2Q15723 593 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 DDX11Q96FC9 970 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 LTV1Q96GA3 475 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-215ENST00000566843 IMPACTQ9P2X3 320 aa18.37■□□□□ 0.53
COMMD4-215ENST00000566843 NCAPD2Q15021 1401 aa18.36■□□□□ 0.53
COMMD4-215ENST00000566843 COL15A1P39059 1388 aa18.36■□□□□ 0.53
COMMD4-215ENST00000566843 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
COMMD4-215ENST00000566843 Q6ZUG5 572 aa18.36■□□□□ 0.53
COMMD4-215ENST00000566843 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
COMMD4-215ENST00000566843 HEG1Q9ULI3 1381 aa18.36■□□□□ 0.53
COMMD4-215ENST00000566843 GRM8O00222 908 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 PFKFB2O60825 505 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 FAM160A1Q05DH4 1040 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 CWF19L2Q2TBE0 894 aaKnown RBP18.35■□□□□ 0.53
COMMD4-215ENST00000566843 CCDC73Q6ZRK6 1079 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 FILIP1Q7Z7B0 1213 aa18.35■□□□□ 0.53
COMMD4-215ENST00000566843 BICC1Q9H694 974 aaKnown RBP18.35■□□□□ 0.53
COMMD4-215ENST00000566843 U3KPZ7 1027 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-215ENST00000566843 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
COMMD4-215ENST00000566843 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-215ENST00000566843 KCNJ6P48051 423 aa18.34■□□□□ 0.53
COMMD4-215ENST00000566843 SCRN1Q12765 414 aa18.34■□□□□ 0.53
COMMD4-215ENST00000566843 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
COMMD4-215ENST00000566843 CEP57L1Q8IYX8 460 aa18.34■□□□□ 0.53
COMMD4-215ENST00000566843 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
COMMD4-215ENST00000566843 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.34■□□□□ 0.53
COMMD4-215ENST00000566843 V9GYY5 206 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-215ENST00000566843 ZNF446Q9NWS9 450 aa18.34■□□□□ 0.53
COMMD4-215ENST00000566843 KINO60870 393 aaKnown RBP18.33■□□□□ 0.53
COMMD4-215ENST00000566843 TUBB4AP04350 444 aa18.33■□□□□ 0.53
COMMD4-215ENST00000566843 PROSER3Q2NL68 480 aa18.33■□□□□ 0.53
COMMD4-215ENST00000566843 CCDC93Q567U6 631 aa18.33■□□□□ 0.53
COMMD4-215ENST00000566843 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.53
COMMD4-215ENST00000566843 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.52
COMMD4-215ENST00000566843 PSDA5PKW4 1024 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-215ENST00000566843 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.52
COMMD4-215ENST00000566843 ZNF396Q96N95 335 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-215ENST00000566843 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
COMMD4-215ENST00000566843 HSP90B1P14625 803 aaKnown RBP18.32■□□□□ 0.52
COMMD4-215ENST00000566843 ATP5JP18859 108 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 PSME1Q06323 249 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 TEFQ10587 303 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 USP28Q96RU2 1077 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 LTN1O94822 1766 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 ABCC6O95255 1503 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 CEBPZQ03701 1054 aaKnown RBP18.32■□□□□ 0.52
COMMD4-215ENST00000566843 DHX8Q14562 1220 aaKnown RBP18.32■□□□□ 0.52
COMMD4-215ENST00000566843 BMS1Q14692 1282 aaKnown RBP18.32■□□□□ 0.52
COMMD4-215ENST00000566843 E4F1Q66K89 784 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-215ENST00000566843 CCDC150Q8NCX0 1101 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 IP6K1Q92551 441 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 BPIFA3Q9BQP9 254 aa18.32■□□□□ 0.52
COMMD4-215ENST00000566843 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
COMMD4-215ENST00000566843 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
COMMD4-215ENST00000566843 CYP21A2P08686 494 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 FMR1NBQ8N0W7 255 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-215ENST00000566843 FSIP1Q8NA03 581 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 PPP1R13BQ96KQ4 1090 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 FTOQ9C0B1 505 aaKnown RBP eCLIP18.3■□□□□ 0.52
COMMD4-215ENST00000566843 ZNF609O15014 1411 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 MST1RQ04912 1400 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 NBPF6Q5VWK0 638 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 NBPF4Q96M43 638 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
COMMD4-215ENST00000566843 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
COMMD4-215ENST00000566843 DDX17Q92841 729 aaKnown RBP18.29■□□□□ 0.52
COMMD4-215ENST00000566843 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
COMMD4-215ENST00000566843 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
COMMD4-215ENST00000566843 SALL1Q9NSC2 1324 aa18.29■□□□□ 0.52
COMMD4-215ENST00000566843 TMEM51Q9NW97 253 aa18.29■□□□□ 0.52
COMMD4-215ENST00000566843 XIRP1Q702N8 1843 aaKnown RBP18.29■□□□□ 0.52
COMMD4-215ENST00000566843 A0A087WWV3 80 aa18.29■□□□□ 0.52
COMMD4-215ENST00000566843 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
COMMD4-215ENST00000566843 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms