RNA–Protein interactions for RNA: ENST00000565154.5

PKM-215, Transcript of pyruvate kinase M1/2, human

APPRIS ALT1 TSL 2 BASIC

Gene PKM, Length 2,004 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-215	ENST00000565154	COL24A1	Q17RW2	1714 aa		24.53	■■□□□ 1.52
PKM-215	ENST00000565154	AKAP11	Q9UKA4	1901 aa		24.53	■■□□□ 1.52
PKM-215	ENST00000565154	GOLIM4	O00461	696 aa		24.53	■■□□□ 1.52
PKM-215	ENST00000565154	HSP90B1	P14625	803 aa	Known RBP	24.53	■■□□□ 1.52
PKM-215	ENST00000565154	CCDC158	Q5M9N0	1113 aa		24.53	■■□□□ 1.52
PKM-215	ENST00000565154	TRPC5	Q9UL62	973 aa	Predicted RBP	24.53	■■□□□ 1.52
PKM-215	ENST00000565154	ONECUT3	O60422	494 aa	Predicted RBP	24.52	■■□□□ 1.52
PKM-215	ENST00000565154	ADORA1	P30542	326 aa		24.52	■■□□□ 1.52
PKM-215	ENST00000565154	MCM4	P33991	863 aa		24.52	■■□□□ 1.52
PKM-215	ENST00000565154	ATP2B3	Q16720	1220 aa		24.52	■■□□□ 1.52
PKM-215	ENST00000565154	VGLL2	Q8N8G2	317 aa		24.52	■■□□□ 1.52
PKM-215	ENST00000565154	TNPO1	Q92973	898 aa	Known RBP	24.52	■■□□□ 1.52
PKM-215	ENST00000565154	RTL9	Q8NET4	1388 aa		24.52	■■□□□ 1.52
PKM-215	ENST00000565154	HCLS1	P14317	486 aa	Predicted RBP	24.52	■■□□□ 1.52
PKM-215	ENST00000565154	RC3H1	Q5TC82	1133 aa	Known RBP	24.52	■■□□□ 1.52
PKM-215	ENST00000565154	TTC14	Q96N46	770 aa		24.52	■■□□□ 1.52
PKM-215	ENST00000565154	FAM177B	A6PVY3	158 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	KCNJ4	P48050	445 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	KCNQ4	P56696	695 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	CUL4A	Q13619	759 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	TTC39A	Q5SRH9	613 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	FAM182B	Q5T319	152 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	GORAB	Q5T7V8	394 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	TM6SF1	Q9BZW5	370 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	C4A	P0C0L4	1744 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	C4B	P0C0L5	1744 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	ZKSCAN1	P17029	563 aa	Predicted RBP	24.51	■■□□□ 1.51
PKM-215	ENST00000565154	CREB3L3	Q68CJ9	461 aa		24.51	■■□□□ 1.51
PKM-215	ENST00000565154	TAF5L	O75529	589 aa		24.5	■■□□□ 1.51
PKM-215	ENST00000565154	ZGPAT	Q8N5A5	531 aa	Known RBP	24.5	■■□□□ 1.51
PKM-215	ENST00000565154		A0A1B0GUL6	1792 aa		24.49	■■□□□ 1.51
PKM-215	ENST00000565154	MCMDC2	Q4G0Z9	681 aa		24.49	■■□□□ 1.51
PKM-215	ENST00000565154	RPAP1	Q9BWH6	1393 aa	Predicted RBP	24.49	■■□□□ 1.51
PKM-215	ENST00000565154	CAST	P20810	708 aa	Known RBP	24.49	■■□□□ 1.51
PKM-215	ENST00000565154	RNF20	Q5VTR2	975 aa		24.49	■■□□□ 1.51
PKM-215	ENST00000565154	CCNL1	Q9UK58	526 aa	Predicted RBP	24.49	■■□□□ 1.51
PKM-215	ENST00000565154	MROH5	Q6ZUA9	1318 aa		24.48	■■□□□ 1.51
PKM-215	ENST00000565154	SLC27A2	O14975	620 aa		24.48	■■□□□ 1.51
PKM-215	ENST00000565154	PDE8B	O95263	885 aa		24.48	■■□□□ 1.51
PKM-215	ENST00000565154	NUCB2	P80303	420 aa		24.48	■■□□□ 1.51
PKM-215	ENST00000565154	CCDC152	Q4G0S7	254 aa		24.48	■■□□□ 1.51
PKM-215	ENST00000565154	INTS4	Q96HW7	963 aa	Known RBP	24.48	■■□□□ 1.51
PKM-215	ENST00000565154	JAKMIP1	Q96N16	626 aa	Known RBP	24.48	■■□□□ 1.51
PKM-215	ENST00000565154	CHGB	P05060	677 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	GBP4	Q96PP9	640 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	HMG20B	Q9P0W2	317 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	RPS6KA4	O75676	772 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	ADCK5	Q3MIX3	580 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	USPL1	Q5W0Q7	1092 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	NOL8	Q76FK4	1167 aa	Known RBP	24.47	■■□□□ 1.51
PKM-215	ENST00000565154	ZSWIM6	Q9HCJ5	1215 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	HELLS	Q9NRZ9	838 aa		24.47	■■□□□ 1.51
PKM-215	ENST00000565154	DDX11L8	A8MPP1	907 aa		24.46	■■□□□ 1.51
PKM-215	ENST00000565154	DEK	P35659	375 aa	Known RBP	24.46	■■□□□ 1.51
PKM-215	ENST00000565154	SEPT12	Q8IYM1	358 aa		24.46	■■□□□ 1.51
PKM-215	ENST00000565154	SEC62	Q99442	399 aa	Known RBP	24.46	■■□□□ 1.51
PKM-215	ENST00000565154	BRWD3	Q6RI45	1802 aa		24.46	■■□□□ 1.51
PKM-215	ENST00000565154	CYP2E1	P05181	493 aa	Predicted RBP	24.45	■■□□□ 1.51
PKM-215	ENST00000565154	SSFA2	P28290	1259 aa		24.45	■■□□□ 1.51
PKM-215	ENST00000565154	AK2	P54819	239 aa		24.45	■■□□□ 1.5
PKM-215	ENST00000565154	ZMYM1	Q5SVZ6	1142 aa		24.45	■■□□□ 1.5
PKM-215	ENST00000565154	ZNF512B	Q96KM6	892 aa	Predicted RBP	24.45	■■□□□ 1.5
PKM-215	ENST00000565154	NARF	Q9UHQ1	456 aa		24.45	■■□□□ 1.5
PKM-215	ENST00000565154	CYP46A1	Q9Y6A2	500 aa		24.45	■■□□□ 1.5
PKM-215	ENST00000565154	FKBP4	Q02790	459 aa	Known RBP eCLIP	24.44	■■□□□ 1.5
PKM-215	ENST00000565154	PUM3	Q15397	648 aa	Known RBP	24.44	■■□□□ 1.5
PKM-215	ENST00000565154	VPS53	Q5VIR6	699 aa		24.44	■■□□□ 1.5
PKM-215	ENST00000565154	CCDC129	Q6ZRS4	1044 aa		24.44	■■□□□ 1.5
PKM-215	ENST00000565154	GNPAT	O15228	680 aa		24.44	■■□□□ 1.5
PKM-215	ENST00000565154	RNF113A	O15541	343 aa	Known RBP	24.44	■■□□□ 1.5
PKM-215	ENST00000565154	SCARF1	Q14162	830 aa		24.44	■■□□□ 1.5
PKM-215	ENST00000565154	LRRFIP1	Q32MZ4	808 aa	Known RBP	24.44	■■□□□ 1.5
PKM-215	ENST00000565154	RUFY3	Q7L099	469 aa		24.44	■■□□□ 1.5
PKM-215	ENST00000565154	MPHOSPH8	Q99549	860 aa		24.44	■■□□□ 1.5
PKM-215	ENST00000565154	LAMA4	Q16363	1823 aa		24.43	■■□□□ 1.5
PKM-215	ENST00000565154	MYO5A	Q9Y4I1	1855 aa	Known RBP	24.43	■■□□□ 1.5
PKM-215	ENST00000565154	TSGA10IP	Q3SY00	556 aa		24.43	■■□□□ 1.5
PKM-215	ENST00000565154	CLEC17A	Q6ZS10	378 aa		24.43	■■□□□ 1.5
PKM-215	ENST00000565154	BCL2L12	Q9HB09	334 aa		24.43	■■□□□ 1.5
PKM-215	ENST00000565154	SEC31B	Q9NQW1	1179 aa		24.43	■■□□□ 1.5
PKM-215	ENST00000565154		U3KPZ7	1027 aa	Predicted RBP	24.43	■■□□□ 1.5
PKM-215	ENST00000565154	CPA1	P15085	419 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	PSMA5	P28066	241 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	COL4A1	P02462	1669 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	DOCK2	Q92608	1830 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	FGFR2	P21802	821 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	LPIN2	Q92539	896 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	PDRG1	Q9NUG6	133 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	LIMCH1	Q9UPQ0	1083 aa		24.42	■■□□□ 1.5
PKM-215	ENST00000565154	MAST3	O60307	1309 aa		24.41	■■□□□ 1.5
PKM-215	ENST00000565154	ZFY	P08048	801 aa	Predicted RBP	24.4	■■□□□ 1.5
PKM-215	ENST00000565154	TAF1	P21675	1872 aa		24.4	■■□□□ 1.5
PKM-215	ENST00000565154	IGHMBP2	P38935	993 aa	Known RBP	24.4	■■□□□ 1.5
PKM-215	ENST00000565154	MCAM	P43121	646 aa		24.4	■■□□□ 1.5
PKM-215	ENST00000565154	ZAP70	P43403	619 aa		24.4	■■□□□ 1.5
PKM-215	ENST00000565154	RTCB	Q9Y3I0	505 aa	Known RBP	24.4	■■□□□ 1.5
PKM-215	ENST00000565154	PKP1	Q13835	747 aa		24.4	■■□□□ 1.5
PKM-215	ENST00000565154	GSE1	Q14687	1217 aa		24.4	■■□□□ 1.5
PKM-215	ENST00000565154	ERFE	Q4G0M1	354 aa		24.4	■■□□□ 1.5
PKM-215	ENST00000565154	TBC1D9B	Q66K14	1250 aa		24.4	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms