RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 PHRF1Q9P1Y6 1649 aaKnown RBP7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 MARCH10Q8NA82 808 aaPredicted RBP7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 DCAF11Q8TEB1 546 aa7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 COL5A2P05997 1499 aaPredicted RBP7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 ADGRB1O14514 1584 aa7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 MYOM1P52179 1685 aa7.54□□□□□ -1.2
TUBGCP4-209ENST00000564511 USP19O94966 1318 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 ATP5J2-PTCD1G3V325 749 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 MCCD1P59942 119 aaPredicted RBP7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 ERVK-9P63128 1117 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 RNFT1Q5M7Z0 435 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 NDUFB9Q9Y6M9 179 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 POLR3AO14802 1390 aaPredicted RBP7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 CASZ1Q86V15 1759 aa7.53□□□□□ -1.2
TUBGCP4-209ENST00000564511 EXOC5O00471 708 aa7.52□□□□□ -1.21
TUBGCP4-209ENST00000564511 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
TUBGCP4-209ENST00000564511 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
TUBGCP4-209ENST00000564511 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
TUBGCP4-209ENST00000564511 PARP4Q9UKK3 1724 aaKnown RBP7.52□□□□□ -1.21
TUBGCP4-209ENST00000564511 LMO7Q8WWI1 1683 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 A0A1W2PRU2 124 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 CDC14CA4D256 554 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 RHOQP17081 205 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 SCTRP47872 440 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 PEAK1Q9H792 1746 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 WDR17Q8IZU2 1322 aa7.51□□□□□ -1.21
TUBGCP4-209ENST00000564511 AATKQ6ZMQ8 1374 aa7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 MEN1O00255 615 aa7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 CSB-PGBD3P0DP91 1061 aa7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 CUEDC1Q9NWM3 386 aaPredicted RBP7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 PCDHB11Q9Y5F2 797 aa7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 RGPD3A6NKT7 1758 aaPredicted RBP7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 RGPD4Q7Z3J3 1758 aa7.5□□□□□ -1.21
TUBGCP4-209ENST00000564511 ITSN1Q15811 1721 aa7.49□□□□□ -1.21
TUBGCP4-209ENST00000564511 HSPA6P17066 643 aa7.49□□□□□ -1.21
TUBGCP4-209ENST00000564511 GPC1P35052 558 aa7.49□□□□□ -1.21
TUBGCP4-209ENST00000564511 ACSBG1Q96GR2 724 aa7.49□□□□□ -1.21
TUBGCP4-209ENST00000564511 OSBPL3Q9H4L5 887 aa7.49□□□□□ -1.21
TUBGCP4-209ENST00000564511 BCL9O00512 1426 aa7.49□□□□□ -1.21
TUBGCP4-209ENST00000564511 MAP3K5Q99683 1374 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 TRAK2O60296 914 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 POLD1P28340 1107 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 PPIP5K1Q6PFW1 1433 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 CARD10Q9BWT7 1032 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 CEP126Q9P2H0 1117 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 WWC3Q9ULE0 1092 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 LRRC37A3O60309 1634 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 SBF2Q86WG5 1849 aa7.48□□□□□ -1.21
TUBGCP4-209ENST00000564511 CHD4Q14839 1912 aa7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 APBB1O00213 710 aa7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 ZNF827Q17R98 1081 aa7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 ARHGEF25Q86VW2 580 aa7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 GRIP2Q9C0E4 1043 aa7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 TBC1D2BQ9UPU7 963 aa7.47□□□□□ -1.21
TUBGCP4-209ENST00000564511 BRD4O60885 1362 aaPredicted RBP7.46□□□□□ -1.21
TUBGCP4-209ENST00000564511 GRIN3BO60391 1043 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 SLURP2P0DP57 97 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 POU4F2Q12837 409 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 CLN3Q13286 438 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 CYP2U1Q7Z449 544 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 KCNH5Q8NCM2 988 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 NLGN2Q8NFZ4 835 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 WHAMMQ8TF30 809 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 NLRP3Q96P20 1036 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 CCDC85AQ96PX6 553 aaPredicted RBP7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 LRRC4BQ9NT99 713 aa7.46□□□□□ -1.22
TUBGCP4-209ENST00000564511 IRF5Q13568 498 aa7.45□□□□□ -1.22
TUBGCP4-209ENST00000564511 NBPF1Q3BBV0 1214 aa7.45□□□□□ -1.22
TUBGCP4-209ENST00000564511 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
TUBGCP4-209ENST00000564511 ADAMTS8Q9UP79 889 aa7.45□□□□□ -1.22
TUBGCP4-209ENST00000564511 CCDC7Q96M83 1385 aa7.45□□□□□ -1.22
TUBGCP4-209ENST00000564511 TOPAZ1Q8N9V7 1692 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 USP6P35125 1406 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 ARHGEF28Q8N1W1 1705 aaKnown RBP7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 GSK3AP49840 483 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 KCNMA1Q12791 1236 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 GAS6Q14393 721 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 DBN1Q16643 649 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 TSGA10IPQ3SY00 556 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 SLC27A3Q5K4L6 730 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 NLRP2Q9NX02 1062 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 TFCP2L1Q9NZI6 479 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 CENPJQ9HC77 1338 aaPredicted RBP7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 TNS2Q63HR2 1409 aa7.44□□□□□ -1.22
TUBGCP4-209ENST00000564511 SLIT3O75094 1523 aa7.43□□□□□ -1.22
TUBGCP4-209ENST00000564511 KCNQ4P56696 695 aa7.43□□□□□ -1.22
TUBGCP4-209ENST00000564511 TRIM22Q8IYM9 498 aa7.43□□□□□ -1.22
TUBGCP4-209ENST00000564511 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms