RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 PRAMEF22A3QJZ6 481 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 TRIM66O15016 1216 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 ZPR1O75312 459 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 NR1I2O75469 434 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 SNRPA1P09661 255 aaKnown RBP9.53□□□□□ -0.88
SNX29-201ENST00000562510 CD46P15529 392 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 EIF2S2P20042 333 aaKnown RBP9.53□□□□□ -0.88
SNX29-201ENST00000562510 FUT2Q10981 343 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
SNX29-201ENST00000562510 G2E3Q7L622 706 aa9.53□□□□□ -0.88
SNX29-201ENST00000562510 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
SNX29-201ENST00000562510 AAMPQ13685 434 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 AMHR2Q16671 573 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 TMEM57Q8N5G2 664 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 NLGN2Q8NFZ4 835 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 ATG3Q9NT62 314 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 DBF4Q9UBU7 674 aaPredicted RBP9.52□□□□□ -0.89
SNX29-201ENST00000562510 TOGARAM1Q9Y4F4 1720 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 ABCC4O15439 1325 aa9.52□□□□□ -0.89
SNX29-201ENST00000562510 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.894e-7■■■■□ 22.3
SNX29-201ENST00000562510 FLIIQ13045 1269 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
SNX29-201ENST00000562510 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 CCDC136Q96JN2 1154 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 REPIN1Q9BWE0 567 aaKnown RBP9.51□□□□□ -0.89
SNX29-201ENST00000562510 CHPF2Q9P2E5 772 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 ASAP1Q9ULH1 1129 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 CD2APQ9Y5K6 639 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 USP16Q9Y5T5 823 aa9.51□□□□□ -0.89
SNX29-201ENST00000562510 SBF2Q86WG5 1849 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 HSPA6P17066 643 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 SSTR3P32745 418 aaPredicted RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 PHAXQ9H814 394 aaKnown RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 DDX21Q9NR30 783 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNX29-201ENST00000562510 HYPKQ9NX55 129 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 DDX19BQ9UMR2 479 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 KCPQ6ZWJ8 1503 aa9.5□□□□□ -0.89
SNX29-201ENST00000562510 GOLGB1Q14789 3259 aaKnown RBP9.5□□□□□ -0.89
SNX29-201ENST00000562510 PAPPAQ13219 1627 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 TLL1O43897 1013 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 KDM4AO75164 1064 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 FKBP5Q13451 457 aaPredicted RBP9.49□□□□□ -0.89
SNX29-201ENST00000562510 PROSER3Q2NL68 480 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 TEX13AQ9BXU3 409 aaPredicted RBP9.49□□□□□ -0.89
SNX29-201ENST00000562510 ERBB4Q15303 1308 aa9.49□□□□□ -0.89
SNX29-201ENST00000562510 ATP10DQ9P241 1426 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 UBR2Q8IWV8 1755 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
SNX29-201ENST00000562510 ANXA1P04083 346 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 PDE4DQ08499 809 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 LRP10Q7Z4F1 713 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 PARP9Q8IXQ6 854 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 CHMP4BQ9H444 224 aaKnown RBP9.48□□□□□ -0.89
SNX29-201ENST00000562510 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 CCNL1Q9UK58 526 aaPredicted RBP9.48□□□□□ -0.89
SNX29-201ENST00000562510 NHSQ6T4R5 1651 aa9.48□□□□□ -0.89
SNX29-201ENST00000562510 ITGB4P16144 1822 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 CACNA1FO60840 1977 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 F6X3S4 739 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 GGCXP38435 758 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 CCT4P50991 539 aaKnown RBP9.47□□□□□ -0.89
SNX29-201ENST00000562510 MORN1Q5T089 497 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 COL23A1Q86Y22 540 aaPredicted RBP9.47□□□□□ -0.89
SNX29-201ENST00000562510 SCUBE3Q8IX30 993 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 SLC4A9Q96Q91 983 aa9.47□□□□□ -0.89
SNX29-201ENST00000562510 C5P01031 1676 aa9.46□□□□□ -0.89
SNX29-201ENST00000562510 DOT1LQ8TEK3 1739 aa9.46□□□□□ -0.89
SNX29-201ENST00000562510 PI4KAP2A4QPH2 592 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 KCNQ4P56696 695 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
SNX29-201ENST00000562510 SLC4A10Q6U841 1118 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 KSR2Q6VAB6 950 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 DNAJC10Q8IXB1 793 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 PI4KAP1Q8N8J0 262 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 SMARCC1Q92922 1105 aaPredicted RBP9.46□□□□□ -0.9
SNX29-201ENST00000562510 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 ADCY9O60503 1353 aa9.46□□□□□ -0.9
SNX29-201ENST00000562510 CHD4Q14839 1912 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 STARD3NLO95772 234 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 DDX58O95786 925 aaKnown RBP9.45□□□□□ -0.9
SNX29-201ENST00000562510 A1BGP04217 495 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 MYL6BP14649 208 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 COPS6Q7L5N1 327 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 XAGE3Q8WTP9 111 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 DNAAF4Q8WXU2 420 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 SLC27A5Q9Y2P5 690 aa9.45□□□□□ -0.9
SNX29-201ENST00000562510 ADH1BP00325 375 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 274.4 ms