RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 ARID3CA6NKF2 412 aa5.59□□□□□ -1.51
LRRC28-212ENST00000558911 MMP20O60882 483 aa5.59□□□□□ -1.51
LRRC28-212ENST00000558911 PDIA4P13667 645 aaKnown RBP5.59□□□□□ -1.51
LRRC28-212ENST00000558911 SETDB1Q15047 1291 aa5.59□□□□□ -1.51
LRRC28-212ENST00000558911 C11orf91Q3C1V1 193 aa5.59□□□□□ -1.51
LRRC28-212ENST00000558911 UBL7Q96S82 380 aaPredicted RBP5.59□□□□□ -1.51
LRRC28-212ENST00000558911 LACRTQ9GZZ8 138 aa5.59□□□□□ -1.51
LRRC28-212ENST00000558911 LINC01387J3KSC0 135 aa5.58□□□□□ -1.52
LRRC28-212ENST00000558911 ACAD11Q709F0 780 aa5.58□□□□□ -1.52
LRRC28-212ENST00000558911 SLC51AQ86UW1 340 aa5.58□□□□□ -1.52
LRRC28-212ENST00000558911 MAFBQ9Y5Q3 323 aaPredicted RBP5.58□□□□□ -1.52
LRRC28-212ENST00000558911 OPLAHO14841 1288 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 GSC2O15499 205 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 DHX15O43143 795 aaKnown RBP5.57□□□□□ -1.52
LRRC28-212ENST00000558911 WISP1O95388 367 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 PTK7Q13308 1070 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 TREML1Q86YW5 311 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 ANKMY2Q8IV38 441 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 GLMNQ92990 594 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 UTP4Q969X6 686 aaKnown RBP5.57□□□□□ -1.52
LRRC28-212ENST00000558911 PPME1Q9Y570 386 aa5.57□□□□□ -1.52
LRRC28-212ENST00000558911 HMX2A2RU54 273 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L15C9J2P7 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L10C9JJH3 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L13C9JLJ4 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L12C9JPN9 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L11C9JVI0 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L21D6R901 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L18D6R9N7 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L22D6RA61 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L17D6RBQ6 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L19D6RCP7 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L20D6RJB6 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 ADAMTS4O75173 837 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 USP17L24Q0WX57 530 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.56□□□□□ -1.52
LRRC28-212ENST00000558911 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 GALNT11Q8NCW6 608 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 FMNL2Q96PY5 1086 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 CARD10Q9BWT7 1032 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 LRFN2Q9ULH4 789 aa5.56□□□□□ -1.52
LRRC28-212ENST00000558911 GRIK1P39086 918 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 NFIAQ12857 509 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 ZDHHC13Q8IUH4 622 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 ARMC10Q8N2F6 343 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 DCAF11Q8TEB1 546 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 KCNF1Q9H3M0 494 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 KCNK4Q9NYG8 393 aa5.55□□□□□ -1.52
LRRC28-212ENST00000558911 KIAA1324LA8MWY0 1029 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-212ENST00000558911 LMOD1P29536 600 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-212ENST00000558911 CD68P34810 354 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-212ENST00000558911 ATP11AP98196 1134 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 MAP4K3Q8IVH8 894 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 CEP41Q9BYV8 373 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 C7orf69Q9H7B7 122 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 VRTNQ9H8Y1 702 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 SRA1Q9HD15 236 aaKnown RBP5.54□□□□□ -1.52
LRRC28-212ENST00000558911 KCNMB2Q9Y691 235 aa5.54□□□□□ -1.52
LRRC28-212ENST00000558911 LOC105371045A0A1W2PR82 267 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 DDX3YO15523 660 aaKnown RBP5.53□□□□□ -1.52
LRRC28-212ENST00000558911 SART1O43290 800 aaKnown RBP5.53□□□□□ -1.52
LRRC28-212ENST00000558911 FOXO3O43524 673 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 DUOXA2Q1HG44 320 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 Q6ZS46 218 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 CLUAP1Q96AJ1 413 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 SPACA7Q96KW9 195 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 MUC3BQ9H195 1237 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 C11orf16Q9NQ32 467 aa5.53□□□□□ -1.52
LRRC28-212ENST00000558911 WNT11O96014 354 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 EGFRP00533 1210 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 CDC27P30260 824 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 SCNN1AP37088 669 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 FLIIQ13045 1269 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 FZD5Q13467 585 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 CDCA8Q53HL2 280 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 KANK4Q5T7N3 995 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-212ENST00000558911 COL13A1Q5TAT6 717 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-212ENST00000558911 INTS5Q6P9B9 1019 aaKnown RBP5.52□□□□□ -1.53
LRRC28-212ENST00000558911 NLRP13Q86W25 1043 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 SHKBP1Q8TBC3 707 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 MYO19Q96H55 970 aa5.52□□□□□ -1.53
LRRC28-212ENST00000558911 CALR3Q96L12 384 aaKnown RBP5.52□□□□□ -1.53
LRRC28-212ENST00000558911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.52□□□□□ -1.53
LRRC28-212ENST00000558911 UBAP1LF5GYI3 381 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 SPINK2P20155 84 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 WEE1P30291 646 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 COX20Q5RI15 118 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 RNF43Q68DV7 783 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 FAM117BQ6P1L5 589 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 UBASH3BQ8TF42 649 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 PRIMPOLQ96LW4 560 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 DBNDD2Q9BQY9 259 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 PPP1R12CQ9BZL4 782 aa5.51□□□□□ -1.53
LRRC28-212ENST00000558911 SH2B1Q9NRF2 756 aaPredicted RBP5.51□□□□□ -1.53
LRRC28-212ENST00000558911 FAM196BA6NMK8 535 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 FAM177BA6PVY3 158 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 WDR64B1ANS9 1081 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 SMNDC1O75940 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
LRRC28-212ENST00000558911 BMP3P12645 472 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms