RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 HSPA1BP0DMV9 641 aaKnown RBP7.58□□□□□ -1.2
LRRC28-208ENST00000558771 PRKCSHP14314 528 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-208ENST00000558771 RFC4P35249 363 aa7.58□□□□□ -1.2
LRRC28-208ENST00000558771 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-208ENST00000558771 LAPTM4AQ15012 233 aa7.58□□□□□ -1.2
LRRC28-208ENST00000558771 QPCTQ16769 361 aa7.58□□□□□ -1.2
LRRC28-208ENST00000558771 RC3H1Q5TC82 1133 aaKnown RBP7.58□□□□□ -1.2
LRRC28-208ENST00000558771 SMC1BQ8NDV3 1235 aa7.58□□□□□ -1.2
LRRC28-208ENST00000558771 NUDT12Q9BQG2 462 aa7.58□□□□□ -1.2
LRRC28-208ENST00000558771 ZNF831Q5JPB2 1677 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 CNTNAP4Q9C0A0 1308 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 MYH14Q7Z406 1995 aaKnown RBP7.57□□□□□ -1.2
LRRC28-208ENST00000558771 CFAP99D6REC4 459 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 PPM1GO15355 546 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-208ENST00000558771 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 CHRNA5P30532 468 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 DALRD3Q5D0E6 543 aaKnown RBP7.57□□□□□ -1.2
LRRC28-208ENST00000558771 SH3D19Q5HYK7 790 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 TRIM67Q6ZTA4 783 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 PDZRN3Q9UPQ7 1066 aa7.57□□□□□ -1.2
LRRC28-208ENST00000558771 WASHC2AQ641Q2 1341 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 ANKRD26Q9UPS8 1709 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 GDF9O60383 454 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 RASSF7Q02833 373 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 DDR1Q08345 913 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 PTPRNQ16849 979 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 RTL5Q5HYW3 569 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-208ENST00000558771 PTCRAQ6ISU1 281 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-208ENST00000558771 PROCA1Q8NCQ7 364 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-208ENST00000558771 IL27Q8NEV9 243 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 EVA1BQ9NVM1 165 aa7.56□□□□□ -1.2
LRRC28-208ENST00000558771 SRP68Q9UHB9 627 aaKnown RBP7.56□□□□□ -1.2
LRRC28-208ENST00000558771 ERVV-2B6SEH9 535 aa7.55□□□□□ -1.2
LRRC28-208ENST00000558771 NRG2O14511 850 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-208ENST00000558771 TRIM32Q13049 653 aa7.55□□□□□ -1.2
LRRC28-208ENST00000558771 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
LRRC28-208ENST00000558771 CARD14Q9BXL6 1004 aa7.55□□□□□ -1.2
LRRC28-208ENST00000558771 USP42Q9H9J4 1324 aaKnown RBP7.54□□□□□ -1.2
LRRC28-208ENST00000558771 ZC3H4Q9UPT8 1303 aaKnown RBP7.54□□□□□ -1.2
LRRC28-208ENST00000558771 KDM6AO15550 1401 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-208ENST00000558771 GLTPD2A6NH11 291 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 POLRMTO00411 1230 aaKnown RBP7.54□□□□□ -1.2
LRRC28-208ENST00000558771 CCNYL3P0C7X3 344 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 VEGFAP15692 232 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-208ENST00000558771 CRKLP46109 303 aaKnown RBP7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PRR20EP86478 221 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PRR20CP86479 221 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PRR20DP86480 221 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PRR20BP86481 221 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PRR20AP86496 221 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 FOXC1Q12948 553 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PKD2L1Q9P0L9 805 aa7.54□□□□□ -1.2
LRRC28-208ENST00000558771 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
LRRC28-208ENST00000558771 HSP90AB1P08238 724 aaKnown RBP7.53□□□□□ -1.2
LRRC28-208ENST00000558771 LMNB1P20700 586 aa7.53□□□□□ -1.2
LRRC28-208ENST00000558771 TM4SF1P30408 202 aa7.53□□□□□ -1.2
LRRC28-208ENST00000558771 CABP4P57796 275 aa7.53□□□□□ -1.2
LRRC28-208ENST00000558771 KCNH2Q12809 1159 aa7.53□□□□□ -1.2
LRRC28-208ENST00000558771 EIF4A2Q14240 407 aaKnown RBP7.53□□□□□ -1.2
LRRC28-208ENST00000558771 TSC1Q92574 1164 aa7.53□□□□□ -1.2
LRRC28-208ENST00000558771 POLKQ9UBT6 870 aa7.53□□□□□ -1.2
LRRC28-208ENST00000558771 TJP1Q07157 1748 aa7.52□□□□□ -1.2
LRRC28-208ENST00000558771 TIAM2Q8IVF5 1701 aa7.52□□□□□ -1.2
LRRC28-208ENST00000558771 CCDC88AQ3V6T2 1871 aa7.52□□□□□ -1.21
LRRC28-208ENST00000558771 ADAMTS7Q9UKP4 1686 aa7.52□□□□□ -1.21
LRRC28-208ENST00000558771 POTECB2RU33 542 aa7.52□□□□□ -1.21
LRRC28-208ENST00000558771 TNFRSF10AO00220 468 aa7.52□□□□□ -1.21
LRRC28-208ENST00000558771 Q6ZNB5 142 aa7.52□□□□□ -1.21
LRRC28-208ENST00000558771 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
LRRC28-208ENST00000558771 AFDNP55196 1824 aaKnown RBP7.52□□□□□ -1.21
LRRC28-208ENST00000558771 PER1O15534 1290 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-208ENST00000558771 CTHP32929 405 aa7.51□□□□□ -1.21
LRRC28-208ENST00000558771 PLEKHO1Q53GL0 409 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-208ENST00000558771 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
LRRC28-208ENST00000558771 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
LRRC28-208ENST00000558771 ZNF530Q6P9A1 599 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-208ENST00000558771 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
LRRC28-208ENST00000558771 GOPCQ9HD26 462 aa7.51□□□□□ -1.21
LRRC28-208ENST00000558771 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
LRRC28-208ENST00000558771 NRXN2Q9P2S2 1712 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 NFKBIEO00221 500 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 MTHFSP49914 203 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 WNT7BP56706 349 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 SKOR1P84550 965 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 PPP2R2DQ66LE6 453 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 TTLL6Q8N841 843 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 NFATC2IPQ8NCF5 419 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 UNC93B1Q9H1C4 597 aa7.5□□□□□ -1.21
LRRC28-208ENST00000558771 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
LRRC28-208ENST00000558771 WNT7AO00755 349 aa7.49□□□□□ -1.21
LRRC28-208ENST00000558771 FOXN1O15353 648 aa7.49□□□□□ -1.21
LRRC28-208ENST00000558771 TNNT2P45379 298 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-208ENST00000558771 NFIXQ14938 502 aa7.49□□□□□ -1.21
LRRC28-208ENST00000558771 AMOTQ4VCS5 1084 aa7.49□□□□□ -1.21
LRRC28-208ENST00000558771 DNAJC10Q8IXB1 793 aa7.49□□□□□ -1.21
LRRC28-208ENST00000558771 HELBQ8NG08 1087 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-208ENST00000558771 PCMTD1Q96MG8 357 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-208ENST00000558771 SOS1Q07889 1333 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-208ENST00000558771 CARMIL3Q8ND23 1372 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 F12P00748 615 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms