RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	MSTN	O14793	375 aa		7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	PHKA2	P46019	1235 aa		7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	PLA2G4E	Q3MJ16	856 aa		7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	SIRT1	Q96EB6	747 aa		7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	GDF2	Q9UK05	429 aa	Predicted RBP	7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	DOLK	Q9UPQ8	538 aa		7.2	□□□□□ -1.26
SCFD1-223	ENST00000557076	NRXN3	Q9Y4C0	1643 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	THBS1	P07996	1170 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	SLFNL1	Q499Z3	407 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	EFHC2	Q5JST6	749 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	WAPL	Q7Z5K2	1190 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	RHBDD1	Q8TEB9	315 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	SBNO1	A3KN83	1393 aa		7.19	□□□□□ -1.26
SCFD1-223	ENST00000557076	CCDC144A	A2RUR9	1427 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	BRWD3	Q6RI45	1802 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	C4orf17	Q53FE4	359 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	GOLGA6L1	Q8N7Z2	621 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	KLRG1	Q96E93	195 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	TBC1D2B	Q9UPU7	963 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	ARHGEF10	O15013	1369 aa		7.18	□□□□□ -1.26
SCFD1-223	ENST00000557076	PLSCR1	O15162	318 aa		7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	ALYREF	Q86V81	257 aa	Known RBP	7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	RNF135	Q8IUD6	432 aa		7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	PHTF2	Q8N3S3	785 aa		7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	MKL2	Q9ULH7	1088 aa		7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	ROCK1	Q13464	1354 aa		7.17	□□□□□ -1.26
SCFD1-223	ENST00000557076	MSX1	P28360	303 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	PDE3B	Q13370	1112 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	UBAP2L	Q14157	1087 aa	Known RBP	7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	TLR1	Q15399	786 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	GALNT6	Q8NCL4	622 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	SPOCK3	Q9BQ16	436 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	SYT17	Q9BSW7	474 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	CRISPLD1	Q9H336	500 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	RUBCNL	Q9H714	662 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	ETNK1	Q9HBU6	452 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	STK26	Q9P289	416 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	SPATA31A1	Q5TZJ5	1347 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	ABCC11	Q96J66	1382 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	NAIP	Q13075	1403 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	CROCC2	H7BZ55	1655 aa		7.16	□□□□□ -1.26
SCFD1-223	ENST00000557076	NALCN	Q8IZF0	1738 aa		7.15	□□□□□ -1.26
SCFD1-223	ENST00000557076	OXLD1	Q5BKU9	147 aa		7.15	□□□□□ -1.26
SCFD1-223	ENST00000557076	FIGNL1	Q6PIW4	674 aa		7.15	□□□□□ -1.26
SCFD1-223	ENST00000557076	TNS3	Q68CZ2	1445 aa		7.15	□□□□□ -1.27
SCFD1-223	ENST00000557076	MARF1	Q9Y4F3	1742 aa	Known RBP	7.15	□□□□□ -1.27
SCFD1-223	ENST00000557076	LOC105371045	A0A1W2PR82	267 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	SHISA8	B8ZZ34	492 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	PIK3R2	O00459	728 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	BMP4	P12644	408 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	FGFR3	P22607	806 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	IRF5	Q13568	498 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	TBC1D9	Q6ZT07	1266 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	C1orf216	Q8TAB5	229 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076	EDARADD	Q8WWZ3	215 aa		7.14	□□□□□ -1.27
SCFD1-223	ENST00000557076		E9PCH4	1651 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	IQGAP3	Q86VI3	1631 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	ADAM23	O75077	832 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	PROC	P04070	461 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	ITGB2	P05107	769 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	SNRPN	P63162	240 aa	Known RBP	7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	MAP7D1	Q3KQU3	841 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	SLCO4C1	Q6ZQN7	724 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	ABHD17A	Q96GS6	310 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	PRDM11	Q9NQV5	511 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	NDFIP2	Q9NV92	336 aa		7.13	□□□□□ -1.27
SCFD1-223	ENST00000557076	GOLGB1	Q14789	3259 aa	Known RBP	7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	USP32	Q8NFA0	1604 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	NEXMIF	Q5QGS0	1516 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	TECPR2	O15040	1411 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	BNIP3L	O60238	219 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	INHA	P05111	366 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	PLA2G4A	P47712	749 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	GDF10	P55107	478 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	WASHC4	Q2M389	1173 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	TSGA10IP	Q3SY00	556 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	TMEM132E	Q6IEE7	984 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	RRAGC	Q9HB90	399 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	CDC42BPG	Q6DT37	1551 aa		7.12	□□□□□ -1.27
SCFD1-223	ENST00000557076	RRBP1	Q9P2E9	1410 aa	Known RBP	7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	PLEKHH1	Q9ULM0	1364 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	NWD2	Q9ULI1	1742 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	ZBTB7A	O95365	584 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	SOX11	P35716	441 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	EVA1C	P58658	441 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	NLRP8	Q86W28	1048 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	TCP11L2	Q8N4U5	519 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	PMFBP1	Q8TBY8	1022 aa		7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	NIFK	Q9BYG3	293 aa	Known RBP	7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	THRAP3	Q9Y2W1	955 aa	Known RBP	7.11	□□□□□ -1.27
SCFD1-223	ENST00000557076	ADGRF5	Q8IZF2	1346 aa		7.1	□□□□□ -1.27
SCFD1-223	ENST00000557076	STAU1	O95793	577 aa	Known RBP	7.1	□□□□□ -1.27
SCFD1-223	ENST00000557076	ARAF	P10398	606 aa		7.1	□□□□□ -1.27
SCFD1-223	ENST00000557076	PRKCSH	P14314	528 aa	Predicted RBP	7.1	□□□□□ -1.27

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