RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RIMS1Q86UR5 1692 aaKnown RBP6.54□□□□□ -1.36
ATXN3-241ENST00000556374 FAM200AQ8TCP9 573 aa6.53□□□□□ -1.36
ATXN3-241ENST00000556374 TRPM4Q8TD43 1214 aa6.53□□□□□ -1.36
ATXN3-241ENST00000556374 COL26A1Q96A83 441 aa6.53□□□□□ -1.36
ATXN3-241ENST00000556374 LENG1Q96BZ8 264 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-241ENST00000556374 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
ATXN3-241ENST00000556374 RAC1P63000 192 aa6.52□□□□□ -1.37
ATXN3-241ENST00000556374 NKAPLQ5M9Q1 402 aa6.52□□□□□ -1.37
ATXN3-241ENST00000556374 CFAP70Q5T0N1 1121 aa6.52□□□□□ -1.37
ATXN3-241ENST00000556374 BCS1LQ9Y276 419 aa6.52□□□□□ -1.37
ATXN3-241ENST00000556374 A0A0A0MRY4 1105 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 CENPBP07199 599 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-241ENST00000556374 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 ADGRE1Q14246 886 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 CACTIN-AS1Q8N1I8 211 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 NGLY1Q96IV0 654 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 SEMA6BQ9H3T3 888 aa6.51□□□□□ -1.37
ATXN3-241ENST00000556374 DNAJB12Q9NXW2 375 aaKnown RBP6.51□□□□□ -1.37
ATXN3-241ENST00000556374 KDM5BQ9UGL1 1544 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 RGS9O75916 674 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-241ENST00000556374 MICAL2O94851 1124 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 HOXD8P13378 290 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-241ENST00000556374 IDH3AP50213 366 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 GPLD1P80108 840 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 DOC2BQ14184 412 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 RSPO4Q2I0M5 234 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-241ENST00000556374 DCAF11Q8TEB1 546 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 QTRT2Q9H974 415 aaKnown RBP6.5□□□□□ -1.37
ATXN3-241ENST00000556374 JPH1Q9HDC5 661 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-241ENST00000556374 MAGI3Q5TCQ9 1506 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 PTPRGP23470 1445 aa6.5□□□□□ -1.37
ATXN3-241ENST00000556374 ACIN1Q9UKV3 1341 aaKnown RBP6.5□□□□□ -1.37
ATXN3-241ENST00000556374 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
ATXN3-241ENST00000556374 NRLP54845 237 aa6.49□□□□□ -1.37
ATXN3-241ENST00000556374 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
ATXN3-241ENST00000556374 PSAPL1Q6NUJ1 521 aa6.49□□□□□ -1.37
ATXN3-241ENST00000556374 RAB44Q7Z6P3 723 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-241ENST00000556374 SRA1Q9HD15 236 aaKnown RBP6.49□□□□□ -1.37
ATXN3-241ENST00000556374 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 NFKB1P19838 968 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 SOX18P35713 384 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 DGKZQ13574 1117 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 MSL1Q68DK7 614 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 DHX32Q7L7V1 743 aaKnown RBP6.48□□□□□ -1.37
ATXN3-241ENST00000556374 TXNRD3Q86VQ6 643 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 FMR1NBQ8N0W7 255 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-241ENST00000556374 TPSG1Q9NRR2 321 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 FAM13BQ9NYF5 915 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 CLIP1P30622 1438 aa6.48□□□□□ -1.37
ATXN3-241ENST00000556374 PREX1Q8TCU6 1659 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 SELPP16109 830 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 RFX1P22670 979 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 ITGB7P26010 798 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 SLC51AQ86UW1 340 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 VPS8Q8N3P4 1428 aa6.47□□□□□ -1.37
ATXN3-241ENST00000556374 TTBK1Q5TCY1 1321 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-241ENST00000556374 ARHGEF40Q8TER5 1519 aa6.46□□□□□ -1.37
ATXN3-241ENST00000556374 PTCD1O75127 700 aaKnown RBP6.46□□□□□ -1.38
ATXN3-241ENST00000556374 GRNP28799 593 aaKnown RBP6.46□□□□□ -1.38
ATXN3-241ENST00000556374 MBTPS1Q14703 1052 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 GRIK4Q16099 956 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 GRIK5Q16478 980 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 FAM35AQ86V20 835 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 MAP4K3Q8IVH8 894 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 IFT43Q96FT9 208 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 LPIN3Q9BQK8 851 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 UACAQ9BZF9 1416 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 TLR7Q9NYK1 1049 aaKnown RBP6.46□□□□□ -1.38
ATXN3-241ENST00000556374 KLK14Q9P0G3 267 aa6.46□□□□□ -1.38
ATXN3-241ENST00000556374 ARAP3Q8WWN8 1544 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 IQGAP2Q13576 1575 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 FRMPD1Q5SYB0 1578 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 FER1L4A9Z1Z3 1794 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 STRCQ7RTU9 1775 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 OPLAHO14841 1288 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 DYRK3O43781 588 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 RARAP10276 462 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 BRD2P25440 801 aaKnown RBP6.45□□□□□ -1.38
ATXN3-241ENST00000556374 IGF2-ASQ6U949 168 aa6.45□□□□□ -1.38
ATXN3-241ENST00000556374 NOVA2Q9UNW9 492 aaKnown RBP6.45□□□□□ -1.38
ATXN3-241ENST00000556374 RTCBQ9Y3I0 505 aaKnown RBP6.45□□□□□ -1.38
ATXN3-241ENST00000556374 CARMIL2Q6F5E8 1435 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 ATG7O95352 703 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 HSPA2P54652 639 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 PLAURQ03405 335 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 DIEXFQ68CQ4 756 aaKnown RBP6.44□□□□□ -1.38
ATXN3-241ENST00000556374 ELMSAN1Q6PJG2 1045 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 NUDT8Q8WV74 236 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 IGFLR1Q9H665 355 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 ZFATQ9P243 1243 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 NAGPAQ9UK23 515 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 LRFN2Q9ULH4 789 aa6.44□□□□□ -1.38
ATXN3-241ENST00000556374 TTC37Q6PGP7 1564 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms